The 2.0 version of rSNPBase

Variant report

Variant rs10460480
Chromosome Location chr2:98336899-98336900
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:98330000-98337200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr2:98331200-98337200 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr2:98332000-98340000 Weak transcription Esophagus oesophagus
4 chr2:98332600-98337200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr2:98333600-98341800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr2:98335000-98344800 Weak transcription Right Atrium heart
7 chr2:98335600-98338800 Weak transcription Right Ventricle heart
8 chr2:98335800-98337800 Enhancers H1 Cell Line embryonic stem cell
9 chr2:98335800-98337800 Enhancers HUES6 Cell Line embryonic stem cell
10 chr2:98335800-98337800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
11 chr2:98336000-98337000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr2:98336000-98337400 Genic enhancers Fetal Thymus thymus
13 chr2:98336000-98337600 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
14 chr2:98336000-98337800 Enhancers ES-I3 Cell Line embryonic stem cell
15 chr2:98336000-98337800 Genic enhancers Dnd41 blood
16 chr2:98336000-98338000 Genic enhancers Primary T cells from cord blood blood
17 chr2:98336000-98339200 Enhancers Primary T killer naive cells fromperipheralblood blood
18 chr2:98336000-98339600 Weak transcription Fetal Muscle Trunk muscle
19 chr2:98336000-98339800 Genic enhancers Primary T regulatory cells fromperipheralblood blood
20 chr2:98336000-98340400 Weak transcription Spleen Spleen
21 chr2:98336000-98344400 Weak transcription Duodenum Mucosa Duodenum
22 chr2:98336000-98346000 Genic enhancers Primary T helper cells fromperipheralblood blood
23 chr2:98336200-98337200 Weak transcription Primary B cells from peripheral blood blood
24 chr2:98336200-98337400 Genic enhancers Primary T cells effector/memory enriched fromperipheralblood blood
25 chr2:98336200-98337600 Genic enhancers Thymus Thymus
26 chr2:98336200-98337800 Enhancers iPS-15b Cell Line embryonic stem cell
27 chr2:98336200-98345000 Genic enhancers Primary T helper naive cells fromperipheralblood blood
28 chr2:98336200-98345600 Genic enhancers Primary T cells fromperipheralblood blood
29 chr2:98336200-98345800 Genic enhancers Primary T helper naive cells from peripheral blood blood
30 chr2:98336200-98351200 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
31 chr2:98336400-98337400 Genic enhancers Primary T killer memory cells from peripheral blood blood
32 chr2:98336400-98337800 Enhancers H9 Cell Line embryonic stem cell
33 chr2:98336400-98337800 Enhancers HUES48 Cell Line embryonic stem cell
34 chr2:98336400-98337800 Enhancers HUES64 Cell Line embryonic stem cell
35 chr2:98336400-98337800 Genic enhancers Primary T helper memory cells from peripheral blood 1 blood
36 chr2:98336400-98340200 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
37 chr2:98336400-98345000 Genic enhancers Primary T helper memory cells from peripheral blood 2 blood
38 chr2:98336400-98346000 Genic enhancers Primary T helper cells PMA-I stimulated --
39 chr2:98336400-98361400 Weak transcription Primary B cells from cord blood blood
40 chr2:98336600-98346200 Weak transcription Primary hematopoietic stem cells blood
41 chr2:98336600-98346200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr2:98336600-98358800 Weak transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015