Variant report

Variant	rs10466083
Chromosome Location	chr10:23214716-23214717
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10828356	1.00[CEU][hapmap]
rs10828372	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10828373	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10828375	0.80[EUR][1000 genomes]
rs10828385	1.00[CEU][hapmap]
rs10828386	1.00[CEU][hapmap]
rs11013200	1.00[CEU][hapmap]
rs11013202	1.00[CEU][hapmap]
rs11013203	1.00[CEU][hapmap]
rs11013213	1.00[CEU][hapmap]
rs11511182	1.00[CEU][hapmap]
rs11511184	1.00[CEU][hapmap]
rs11593763	1.00[CEU][hapmap]
rs11598621	1.00[CEU][hapmap]
rs7100326	1.00[CEU][hapmap]
rs9730948	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2764013	chr10:23087298-23239345	Enhancers Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23214400-23216600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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