Variant report

Variant	rs10491263
Chromosome Location	chr5:145426157-145426158
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr5:145419348..145421687-chr5:145425809..145428439,2	MCF-7	breast:
2	chr5:145425852..145428406-chr5:145465535..145467053,2	K562	blood:
3	chr5:145360817..145362875-chr5:145425085..145428681,3	MCF-7	breast:
4	chr5:145418838..145422212-chr5:145426068..145429062,3	K562	blood:

rs_ID	r²[population]
rs17491085	1.00[ASW][hapmap];1.00[MEX][hapmap]
rs72818445	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs72818452	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs72818483	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7725078	0.85[CEU][hapmap]

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:145373400-145428400	Weak transcription	Fetal Stomach	stomach
2	chr5:145412600-145453200	Weak transcription	Pancreas	Pancrea
3	chr5:145414000-145435200	Weak transcription	Aorta	Aorta
4	chr5:145422200-145427200	Weak transcription	Gastric	stomach
5	chr5:145422600-145427000	Weak transcription	Left Ventricle	heart
6	chr5:145422800-145427000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr5:145422800-145431600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr5:145422800-145441800	Weak transcription	Placenta Amnion	Placenta Amnion
9	chr5:145423000-145426200	Weak transcription	Duodenum Mucosa	Duodenum
10	chr5:145423000-145426200	Weak transcription	Fetal Intestine Small	intestine
11	chr5:145423000-145426400	Weak transcription	Colonic Mucosa	Colon
12	chr5:145423000-145426800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr5:145423000-145426800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr5:145423000-145427000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr5:145423000-145427000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
16	chr5:145423000-145427000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
17	chr5:145423000-145427000	Weak transcription	Esophagus	oesophagus
18	chr5:145423000-145427000	Weak transcription	Fetal Intestine Large	intestine
19	chr5:145423000-145427200	Weak transcription	Sigmoid Colon	Sigmoid Colon
20	chr5:145423000-145431000	Weak transcription	Osteobl	bone
21	chr5:145423400-145427000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr5:145423400-145427000	Weak transcription	Hela-S3	cervix
23	chr5:145423600-145426400	Weak transcription	Stomach Mucosa	stomach
24	chr5:145424200-145426200	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
25	chr5:145424400-145426600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
26	chr5:145425400-145428800	Genic enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
27	chr5:145425600-145426400	Genic enhancers	Rectal Mucosa Donor 31	rectum
28	chr5:145425600-145428800	Genic enhancers	NHEK	skin
29	chr5:145425800-145426400	Enhancers	Small Intestine	intestine
30	chr5:145425800-145427600	Enhancers	Rectal Mucosa Donor 29	rectum
31	chr5:145426000-145427400	Enhancers	HMEC	breast
32	chr5:145426000-145427600	Enhancers	Skeletal Muscle Female	skeletal muscle
33	chr5:145426000-145428200	Weak transcription	HepG2	liver
34	chr5:145426000-145431000	Weak transcription	HSMM	muscle

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