Variant report

Variant rs10494241
Chromosome Location chr1:145491909-145491910
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145477600-145498400 Weak transcription Gastric stomach
2 chr1:145478600-145493200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr1:145478800-145498600 Weak transcription A549 lung
4 chr1:145479400-145493000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr1:145479600-145498000 Weak transcription NHEK skin
6 chr1:145479600-145498400 Weak transcription HMEC breast
7 chr1:145479600-145506800 Weak transcription Colonic Mucosa Colon
8 chr1:145480000-145498400 Weak transcription Fetal Kidney kidney
9 chr1:145480400-145506800 Weak transcription Small Intestine intestine
10 chr1:145480800-145494200 Strong transcription Primary T cells from cord blood blood
11 chr1:145480800-145498000 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr1:145481000-145499000 Weak transcription Fetal Brain Male brain
13 chr1:145481000-145506600 Weak transcription Brain Substantia Nigra brain
14 chr1:145481200-145501400 Strong transcription Fetal Muscle Leg muscle
15 chr1:145481400-145492000 Weak transcription Rectal Smooth Muscle rectum
16 chr1:145481400-145498400 Weak transcription Aorta Aorta
17 chr1:145481400-145506400 Weak transcription Pancreas Pancrea
18 chr1:145481600-145497400 Weak transcription Brain Hippocampus Middle brain
19 chr1:145482600-145492800 Strong transcription Fetal Adrenal Gland Adrenal Gland
20 chr1:145483200-145492400 Weak transcription Brain Anterior Caudate brain
21 chr1:145483600-145492200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr1:145484400-145493200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr1:145484400-145497400 Weak transcription Hela-S3 cervix
24 chr1:145484400-145498000 Weak transcription Spleen Spleen
25 chr1:145484600-145499400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr1:145485200-145492000 Weak transcription Lung lung
27 chr1:145486000-145498200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr1:145486600-145492000 Weak transcription Right Ventricle heart
29 chr1:145487600-145497400 Weak transcription Brain Germinal Matrix brain
30 chr1:145487600-145497400 Weak transcription Psoas Muscle Psoas
31 chr1:145487600-145498000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr1:145487600-145498400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr1:145487600-145507000 Weak transcription Fetal Heart heart
34 chr1:145488000-145497600 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr1:145488000-145497800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr1:145488000-145498200 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr1:145488000-145506800 Weak transcription iPS-18 Cell Line embryonic stem cell
38 chr1:145488400-145492000 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr1:145488400-145498400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr1:145488600-145492000 Weak transcription Brain Inferior Temporal Lobe brain
41 chr1:145488600-145492000 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr1:145488600-145492000 Weak transcription Osteobl bone
43 chr1:145488600-145497400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr1:145488800-145492000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
45 chr1:145489200-145497200 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr1:145489200-145498400 Weak transcription Placenta Placenta
47 chr1:145489400-145493600 Strong transcription Primary T regulatory cells fromperipheralblood blood
48 chr1:145489400-145502200 Strong transcription Fetal Stomach stomach
49 chr1:145489600-145495400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr1:145489800-145493800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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