The 2.0 version of rSNPBase

Variant report

Variant rs6672807
Chromosome Location chr1:145460000-145460001
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145455200-145469800 Weak transcription Aorta Aorta
2 chr1:145456200-145461000 Weak transcription Ovary ovary
3 chr1:145456200-145462000 Weak transcription A549 lung
4 chr1:145456200-145469800 Weak transcription Fetal Muscle Trunk muscle
5 chr1:145457000-145462000 Weak transcription Lung lung
6 chr1:145457000-145462600 Weak transcription Esophagus oesophagus
7 chr1:145457000-145466000 Weak transcription Small Intestine intestine
8 chr1:145457000-145470000 Weak transcription Gastric stomach
9 chr1:145457400-145462000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr1:145457400-145462000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr1:145457400-145462000 Weak transcription Fetal Intestine Large intestine
12 chr1:145457400-145469400 Weak transcription Fetal Heart heart
13 chr1:145457400-145469800 Weak transcription Psoas Muscle Psoas
14 chr1:145457400-145469800 Weak transcription NH-A brain
15 chr1:145457400-145470000 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr1:145457600-145460000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr1:145457600-145462200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr1:145457600-145462600 Weak transcription Brain Anterior Caudate brain
19 chr1:145457600-145466400 Weak transcription Brain Substantia Nigra brain
20 chr1:145457600-145467200 Weak transcription Brain Inferior Temporal Lobe brain
21 chr1:145457600-145467600 Weak transcription Right Atrium heart
22 chr1:145457600-145469200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr1:145457600-145469600 Weak transcription Brain Cingulate Gyrus brain
24 chr1:145457600-145469600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr1:145457600-145469600 Weak transcription Duodenum Mucosa Duodenum
26 chr1:145457800-145460400 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr1:145457800-145461600 Weak transcription HepG2 liver
28 chr1:145457800-145461800 Weak transcription Primary neutrophils fromperipheralblood blood
29 chr1:145457800-145461800 Weak transcription Adipose Nuclei Adipose
30 chr1:145457800-145462000 Weak transcription Monocytes-CD14+_RO01746 blood
31 chr1:145457800-145462200 Weak transcription Primary monocytes fromperipheralblood blood
32 chr1:145457800-145462400 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr1:145457800-145463600 Weak transcription Colon Smooth Muscle Colon
34 chr1:145457800-145464200 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr1:145457800-145466800 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr1:145457800-145467200 Weak transcription Fetal Intestine Small intestine
37 chr1:145457800-145467200 Weak transcription Thymus Thymus
38 chr1:145457800-145467400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr1:145457800-145468800 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr1:145457800-145469200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr1:145457800-145469200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr1:145457800-145469200 Weak transcription Stomach Smooth Muscle stomach
43 chr1:145457800-145469400 Weak transcription Brain Angular Gyrus brain
44 chr1:145457800-145469400 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr1:145457800-145469400 Weak transcription Rectal Smooth Muscle rectum
46 chr1:145457800-145469600 Weak transcription Brain Hippocampus Middle brain
47 chr1:145458000-145460400 Weak transcription Primary T helper cells PMA-I stimulated --
48 chr1:145458000-145460400 Weak transcription K562 blood
49 chr1:145458000-145460800 Weak transcription Fetal Thymus thymus
50 chr1:145458000-145461800 Weak transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015