The 2.0 version of rSNPBase

Variant report

Variant rs56280100
Chromosome Location chr1:145462050-145462051
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145455200-145469800 Weak transcription Aorta Aorta
2 chr1:145456200-145469800 Weak transcription Fetal Muscle Trunk muscle
3 chr1:145457000-145462600 Weak transcription Esophagus oesophagus
4 chr1:145457000-145466000 Weak transcription Small Intestine intestine
5 chr1:145457000-145470000 Weak transcription Gastric stomach
6 chr1:145457400-145469400 Weak transcription Fetal Heart heart
7 chr1:145457400-145469800 Weak transcription Psoas Muscle Psoas
8 chr1:145457400-145469800 Weak transcription NH-A brain
9 chr1:145457400-145470000 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr1:145457600-145462200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr1:145457600-145462600 Weak transcription Brain Anterior Caudate brain
12 chr1:145457600-145466400 Weak transcription Brain Substantia Nigra brain
13 chr1:145457600-145467200 Weak transcription Brain Inferior Temporal Lobe brain
14 chr1:145457600-145467600 Weak transcription Right Atrium heart
15 chr1:145457600-145469200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr1:145457600-145469600 Weak transcription Brain Cingulate Gyrus brain
17 chr1:145457600-145469600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr1:145457600-145469600 Weak transcription Duodenum Mucosa Duodenum
19 chr1:145457800-145462200 Weak transcription Primary monocytes fromperipheralblood blood
20 chr1:145457800-145462400 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr1:145457800-145463600 Weak transcription Colon Smooth Muscle Colon
22 chr1:145457800-145464200 Weak transcription Fetal Adrenal Gland Adrenal Gland
23 chr1:145457800-145466800 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr1:145457800-145467200 Weak transcription Fetal Intestine Small intestine
25 chr1:145457800-145467200 Weak transcription Thymus Thymus
26 chr1:145457800-145467400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr1:145457800-145468800 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr1:145457800-145469200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr1:145457800-145469200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr1:145457800-145469200 Weak transcription Stomach Smooth Muscle stomach
31 chr1:145457800-145469400 Weak transcription Brain Angular Gyrus brain
32 chr1:145457800-145469400 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr1:145457800-145469400 Weak transcription Rectal Smooth Muscle rectum
34 chr1:145457800-145469600 Weak transcription Brain Hippocampus Middle brain
35 chr1:145458000-145464800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr1:145458000-145466600 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr1:145458000-145467000 Weak transcription Primary hematopoietic stem cells blood
38 chr1:145458000-145467200 Weak transcription Primary B cells from cord blood blood
39 chr1:145458000-145467200 Weak transcription Dnd41 blood
40 chr1:145458000-145469400 Weak transcription Fetal Brain Female brain
41 chr1:145458000-145469400 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr1:145458000-145469600 Weak transcription Osteobl bone
43 chr1:145458000-145469800 Weak transcription Fetal Lung lung
44 chr1:145458200-145467200 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr1:145458200-145467200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr1:145458200-145467400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
47 chr1:145459400-145463000 Enhancers Liver Liver
48 chr1:145459800-145463400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr1:145460000-145465800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr1:145460000-145468600 Weak transcription Primary T cells fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015