Variant report

Variant rs59489049
Chromosome Location chr1:145493782-145493783
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145477600-145498400 Weak transcription Gastric stomach
2 chr1:145478800-145498600 Weak transcription A549 lung
3 chr1:145479600-145498000 Weak transcription NHEK skin
4 chr1:145479600-145498400 Weak transcription HMEC breast
5 chr1:145479600-145506800 Weak transcription Colonic Mucosa Colon
6 chr1:145480000-145498400 Weak transcription Fetal Kidney kidney
7 chr1:145480400-145506800 Weak transcription Small Intestine intestine
8 chr1:145480800-145494200 Strong transcription Primary T cells from cord blood blood
9 chr1:145480800-145498000 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr1:145481000-145499000 Weak transcription Fetal Brain Male brain
11 chr1:145481000-145506600 Weak transcription Brain Substantia Nigra brain
12 chr1:145481200-145501400 Strong transcription Fetal Muscle Leg muscle
13 chr1:145481400-145498400 Weak transcription Aorta Aorta
14 chr1:145481400-145506400 Weak transcription Pancreas Pancrea
15 chr1:145481600-145497400 Weak transcription Brain Hippocampus Middle brain
16 chr1:145484400-145497400 Weak transcription Hela-S3 cervix
17 chr1:145484400-145498000 Weak transcription Spleen Spleen
18 chr1:145484600-145499400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr1:145486000-145498200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr1:145487600-145497400 Weak transcription Brain Germinal Matrix brain
21 chr1:145487600-145497400 Weak transcription Psoas Muscle Psoas
22 chr1:145487600-145498000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr1:145487600-145498400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
24 chr1:145487600-145507000 Weak transcription Fetal Heart heart
25 chr1:145488000-145497600 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr1:145488000-145497800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr1:145488000-145498200 Weak transcription HUES6 Cell Line embryonic stem cell
28 chr1:145488000-145506800 Weak transcription iPS-18 Cell Line embryonic stem cell
29 chr1:145488400-145498400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr1:145488600-145497400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr1:145489200-145497200 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr1:145489200-145498400 Weak transcription Placenta Placenta
33 chr1:145489400-145502200 Strong transcription Fetal Stomach stomach
34 chr1:145489600-145495400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr1:145489800-145493800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr1:145489800-145493800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
37 chr1:145489800-145500000 Strong transcription Primary T cells fromperipheralblood blood
38 chr1:145490000-145494200 Strong transcription Primary T helper cells fromperipheralblood blood
39 chr1:145490000-145495400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr1:145490000-145495400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr1:145490000-145496000 Strong transcription Fetal Thymus thymus
42 chr1:145490000-145496400 Strong transcription Cortex derived primary cultured neurospheres brain
43 chr1:145490200-145494000 Strong transcription Primary T helper cells PMA-I stimulated --
44 chr1:145490200-145494200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr1:145490200-145494200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr1:145490200-145494200 Strong transcription Dnd41 blood
47 chr1:145490400-145494200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
48 chr1:145490400-145504200 Strong transcription Fetal Muscle Trunk muscle
49 chr1:145490600-145494800 Strong transcription Stomach Smooth Muscle stomach
50 chr1:145490800-145497400 Weak transcription Primary T helper naive cells from peripheral blood blood

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