The 2.0 version of rSNPBase

Variant report

Variant rs73006812
Chromosome Location chr1:145490400-145490401
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:145477600-145498400 Weak transcription Gastric stomach
2 chr1:145478600-145493200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr1:145478800-145498600 Weak transcription A549 lung
4 chr1:145479400-145493000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr1:145479600-145498000 Weak transcription NHEK skin
6 chr1:145479600-145498400 Weak transcription HMEC breast
7 chr1:145479600-145506800 Weak transcription Colonic Mucosa Colon
8 chr1:145479800-145491600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr1:145480000-145498400 Weak transcription Fetal Kidney kidney
10 chr1:145480400-145506800 Weak transcription Small Intestine intestine
11 chr1:145480600-145491600 Weak transcription Thymus Thymus
12 chr1:145480600-145491800 Weak transcription Muscle Satellite Cultured Cells --
13 chr1:145480600-145491800 Weak transcription Brain Angular Gyrus brain
14 chr1:145480800-145494200 Strong transcription Primary T cells from cord blood blood
15 chr1:145480800-145498000 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr1:145481000-145491600 Weak transcription NHLF lung
17 chr1:145481000-145499000 Weak transcription Fetal Brain Male brain
18 chr1:145481000-145506600 Weak transcription Brain Substantia Nigra brain
19 chr1:145481200-145501400 Strong transcription Fetal Muscle Leg muscle
20 chr1:145481400-145492000 Weak transcription Rectal Smooth Muscle rectum
21 chr1:145481400-145498400 Weak transcription Aorta Aorta
22 chr1:145481400-145506400 Weak transcription Pancreas Pancrea
23 chr1:145481600-145497400 Weak transcription Brain Hippocampus Middle brain
24 chr1:145482400-145491600 Weak transcription Fetal Intestine Large intestine
25 chr1:145482600-145492800 Strong transcription Fetal Adrenal Gland Adrenal Gland
26 chr1:145483200-145492400 Weak transcription Brain Anterior Caudate brain
27 chr1:145483600-145492200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr1:145484400-145491600 Weak transcription NH-A brain
29 chr1:145484400-145493200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr1:145484400-145497400 Weak transcription Hela-S3 cervix
31 chr1:145484400-145498000 Weak transcription Spleen Spleen
32 chr1:145484600-145499400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:145484800-145491600 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr1:145485200-145492000 Weak transcription Lung lung
35 chr1:145486000-145498200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr1:145486600-145492000 Weak transcription Right Ventricle heart
37 chr1:145486800-145491800 Weak transcription Primary neutrophils fromperipheralblood blood
38 chr1:145487600-145497400 Weak transcription Brain Germinal Matrix brain
39 chr1:145487600-145497400 Weak transcription Psoas Muscle Psoas
40 chr1:145487600-145498000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr1:145487600-145498400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
42 chr1:145487600-145507000 Weak transcription Fetal Heart heart
43 chr1:145487800-145491800 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr1:145487800-145491800 Weak transcription Left Ventricle heart
45 chr1:145488000-145490400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
46 chr1:145488000-145491600 Weak transcription HUVEC blood vessel
47 chr1:145488000-145497600 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr1:145488000-145497800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
49 chr1:145488000-145498200 Weak transcription HUES6 Cell Line embryonic stem cell
50 chr1:145488000-145506800 Weak transcription iPS-18 Cell Line embryonic stem cell

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Last update: Aug 31, 2015