Variant report

Variant	rs10497310
Chromosome Location	chr2:168009405-168009406
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11888230	0.84[JPT][hapmap]
rs12105909	0.81[EUR][1000 genomes]
rs16853051	0.91[JPT][hapmap]
rs16853061	0.88[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs16853128	0.88[CEU][hapmap];0.90[YRI][hapmap];0.83[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs16853166	0.88[CEU][hapmap];0.82[YRI][hapmap]
rs16853185	0.86[CEU][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs61661888	0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6432984	0.81[EUR][1000 genomes]
rs73025703	0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73029709	0.83[EUR][1000 genomes]
rs73029712	0.81[EUR][1000 genomes]
rs73970886	0.81[EUR][1000 genomes]
rs7607357	0.91[JPT][hapmap];0.86[MEX][hapmap]
rs988445	0.88[ASW][hapmap];0.83[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv875376	chr2:167844513-168037489	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:168000200-168009600	Weak transcription	Psoas Muscle	Psoas

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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