Variant report

Variant rs10498734
Chromosome Location chr6:35559773-35559774
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35533600-35563800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr6:35534400-35569000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr6:35535000-35564600 Weak transcription H9 Cell Line embryonic stem cell
4 chr6:35539800-35568400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr6:35541200-35570200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr6:35545000-35564200 Weak transcription Hela-S3 cervix
7 chr6:35545000-35564400 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr6:35545000-35565000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr6:35545000-35567800 Weak transcription Stomach Mucosa stomach
10 chr6:35545000-35568800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr6:35545000-35601800 Weak transcription Fetal Intestine Small intestine
12 chr6:35545200-35568800 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr6:35545400-35569200 Weak transcription Placenta Placenta
14 chr6:35549200-35561400 Genic enhancers Muscle Satellite Cultured Cells --
15 chr6:35549400-35565400 Strong transcription Rectal Mucosa Donor 31 rectum
16 chr6:35550400-35560600 Weak transcription Gastric stomach
17 chr6:35551200-35565200 Genic enhancers Primary T helper cells fromperipheralblood blood
18 chr6:35551800-35561000 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr6:35552000-35564200 Weak transcription NHLF lung
20 chr6:35552000-35565600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr6:35553600-35562000 Strong transcription Fetal Thymus thymus
22 chr6:35553800-35564400 Strong transcription Primary hematopoietic stem cells short term culture blood
23 chr6:35553800-35564800 Strong transcription Sigmoid Colon Sigmoid Colon
24 chr6:35554400-35564000 Weak transcription Fetal Kidney kidney
25 chr6:35554600-35561200 Genic enhancers Primary T cells from cord blood blood
26 chr6:35554800-35569200 Weak transcription Fetal Intestine Large intestine
27 chr6:35555000-35562600 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr6:35555000-35568000 Weak transcription Primary B cells from peripheral blood blood
29 chr6:35555200-35559800 Strong transcription Thymus Thymus
30 chr6:35555200-35562000 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr6:35555200-35562800 Weak transcription Primary hematopoietic stem cells blood
32 chr6:35555200-35564200 Weak transcription NH-A brain
33 chr6:35555200-35564200 Weak transcription Osteobl bone
34 chr6:35555400-35568800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr6:35555400-35569000 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr6:35555800-35565800 Strong transcription Monocytes-CD14+_RO01746 blood
37 chr6:35556200-35565400 Strong transcription Primary monocytes fromperipheralblood blood
38 chr6:35556200-35567800 Weak transcription Primary B cells from cord blood blood
39 chr6:35557000-35560400 Enhancers Skeletal Muscle Male skeletal muscle
40 chr6:35557000-35561200 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
41 chr6:35557000-35561600 Enhancers Fetal Heart heart
42 chr6:35557000-35561600 Enhancers Skeletal Muscle Female skeletal muscle
43 chr6:35557000-35565800 Strong transcription Duodenum Mucosa Duodenum
44 chr6:35557200-35560400 Strong transcription K562 blood
45 chr6:35557200-35560800 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
46 chr6:35557200-35564200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr6:35557200-35564600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr6:35557400-35560800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
49 chr6:35557600-35559800 Enhancers Brain Angular Gyrus brain
50 chr6:35557600-35563600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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