Variant report

Variant	rs10504248
Chromosome Location	chr8:58789168-58789169
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs1112530	1.00[JPT][hapmap]
rs1369771	1.00[ASN][1000 genomes]
rs1369772	1.00[ASN][1000 genomes]
rs1436018	1.00[ASN][1000 genomes]
rs16918685	1.00[ASN][1000 genomes]
rs16922716	0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2082912	1.00[ASN][1000 genomes]
rs2099520	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55774155	1.00[ASN][1000 genomes]
rs58879638	1.00[ASN][1000 genomes]
rs6471659	1.00[ASN][1000 genomes]
rs6992698	1.00[ASN][1000 genomes]
rs73680595	1.00[ASN][1000 genomes]
rs73683803	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831323	chr8:58692548-58849862	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:58785200-58793000	Enhancers	Fetal Heart	heart
2	chr8:58786000-58789200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr8:58786400-58789200	Enhancers	iPS-15b Cell Line	embryonic stem cell
4	chr8:58787600-58789200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr8:58787800-58789200	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr8:58788000-58789200	Enhancers	Right Ventricle	heart
7	chr8:58788000-58790200	Enhancers	Fetal Brain Male	brain
8	chr8:58788400-58789200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr8:58788600-58789800	Weak transcription	HUES6 Cell Line	embryonic stem cell
10	chr8:58788600-58790000	Weak transcription	Fetal Muscle Leg	muscle
11	chr8:58788600-58790200	Weak transcription	Fetal Muscle Trunk	muscle
12	chr8:58789000-58789400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr8:58789000-58789400	Enhancers	Breast Myoepithelial Primary Cells	Breast
14	chr8:58789000-58790200	Enhancers	Fetal Brain Female	brain
15	chr8:58789000-58790800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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