Variant report

Variant	rs10505152
Chromosome Location	chr8:111836805-111836806
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 182 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:173)

rs_ID	r²[population]
rs10505153	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10955544	1.00[ASN][1000 genomes]
rs1387411	1.00[ASN][1000 genomes]
rs1602039	1.00[ASN][1000 genomes]
rs1602040	1.00[ASN][1000 genomes]
rs1602041	1.00[ASN][1000 genomes]
rs1602043	1.00[ASN][1000 genomes]
rs1602044	1.00[ASN][1000 genomes]
rs1602045	1.00[ASN][1000 genomes]
rs16881088	1.00[ASN][1000 genomes]
rs16881101	1.00[ASN][1000 genomes]
rs16881112	1.00[ASN][1000 genomes]
rs16881121	1.00[ASN][1000 genomes]
rs16881123	1.00[ASN][1000 genomes]
rs16881124	1.00[ASN][1000 genomes]
rs16881145	1.00[ASN][1000 genomes]
rs16881150	1.00[ASN][1000 genomes]
rs2130186	1.00[ASN][1000 genomes]
rs2171708	1.00[ASN][1000 genomes]
rs2220482	1.00[ASN][1000 genomes]
rs2351324	1.00[ASN][1000 genomes]
rs2351326	1.00[ASN][1000 genomes]
rs2882627	1.00[ASN][1000 genomes]
rs4634614	1.00[ASN][1000 genomes]
rs56966024	1.00[ASN][1000 genomes]
rs56992800	1.00[ASN][1000 genomes]
rs57005858	1.00[ASN][1000 genomes]
rs57496484	1.00[ASN][1000 genomes]
rs58499839	1.00[ASN][1000 genomes]
rs58685030	1.00[ASN][1000 genomes]
rs58874649	1.00[ASN][1000 genomes]
rs59243778	1.00[ASN][1000 genomes]
rs60413189	1.00[ASN][1000 genomes]
rs60514372	1.00[ASN][1000 genomes]
rs60656886	1.00[ASN][1000 genomes]
rs60696976	1.00[ASN][1000 genomes]
rs61224245	1.00[ASN][1000 genomes]
rs61507597	1.00[ASN][1000 genomes]
rs61574028	1.00[ASN][1000 genomes]
rs62520241	1.00[ASN][1000 genomes]
rs62520242	1.00[ASN][1000 genomes]
rs62520243	1.00[ASN][1000 genomes]
rs62520244	1.00[ASN][1000 genomes]
rs62520245	1.00[ASN][1000 genomes]
rs62520660	1.00[ASN][1000 genomes]
rs62522360	1.00[ASN][1000 genomes]
rs62522361	1.00[ASN][1000 genomes]
rs62522362	1.00[ASN][1000 genomes]
rs62522363	1.00[ASN][1000 genomes]
rs62522364	1.00[ASN][1000 genomes]
rs62522365	1.00[ASN][1000 genomes]
rs62522366	1.00[ASN][1000 genomes]
rs62522367	1.00[ASN][1000 genomes]
rs62522368	1.00[ASN][1000 genomes]
rs62522369	1.00[ASN][1000 genomes]
rs62522370	1.00[ASN][1000 genomes]
rs62522371	1.00[ASN][1000 genomes]
rs62522372	1.00[ASN][1000 genomes]
rs62522373	1.00[ASN][1000 genomes]
rs62522374	1.00[ASN][1000 genomes]
rs62522375	1.00[ASN][1000 genomes]
rs62522376	1.00[ASN][1000 genomes]
rs62522377	1.00[ASN][1000 genomes]
rs62522378	1.00[ASN][1000 genomes]
rs62522379	1.00[ASN][1000 genomes]
rs62522380	1.00[ASN][1000 genomes]
rs62522381	1.00[ASN][1000 genomes]
rs62522382	1.00[ASN][1000 genomes]
rs62522385	1.00[ASN][1000 genomes]
rs62522386	1.00[ASN][1000 genomes]
rs62522387	1.00[ASN][1000 genomes]
rs62522388	1.00[ASN][1000 genomes]
rs62522389	1.00[ASN][1000 genomes]
rs62522391	1.00[ASN][1000 genomes]
rs62526894	1.00[ASN][1000 genomes]
rs62526895	1.00[ASN][1000 genomes]
rs62526896	1.00[ASN][1000 genomes]
rs62526904	1.00[ASN][1000 genomes]
rs62526905	1.00[ASN][1000 genomes]
rs62526906	1.00[ASN][1000 genomes]
rs62526907	1.00[ASN][1000 genomes]
rs62526912	1.00[ASN][1000 genomes]
rs62526913	1.00[ASN][1000 genomes]
rs62526914	1.00[ASN][1000 genomes]
rs62526915	1.00[ASN][1000 genomes]
rs62526916	1.00[ASN][1000 genomes]
rs62526917	1.00[ASN][1000 genomes]
rs62526918	1.00[ASN][1000 genomes]
rs62526919	1.00[ASN][1000 genomes]
rs62526920	1.00[ASN][1000 genomes]
rs62528253	1.00[ASN][1000 genomes]
rs62528254	1.00[ASN][1000 genomes]
rs62530188	1.00[ASN][1000 genomes]
rs62530189	1.00[ASN][1000 genomes]
rs62530190	1.00[ASN][1000 genomes]
rs62530191	1.00[ASN][1000 genomes]
rs62530192	1.00[ASN][1000 genomes]
rs62530193	1.00[ASN][1000 genomes]
rs62530194	1.00[ASN][1000 genomes]
rs62530195	1.00[ASN][1000 genomes]
rs62530197	1.00[ASN][1000 genomes]
rs62530198	1.00[ASN][1000 genomes]
rs62530199	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62530200	1.00[ASN][1000 genomes]
rs62530202	1.00[ASN][1000 genomes]
rs62530204	1.00[ASN][1000 genomes]
rs62530205	1.00[ASN][1000 genomes]
rs62530206	1.00[ASN][1000 genomes]
rs62530208	1.00[ASN][1000 genomes]
rs62530209	1.00[ASN][1000 genomes]
rs62530210	1.00[ASN][1000 genomes]
rs62530211	1.00[ASN][1000 genomes]
rs62530212	1.00[ASN][1000 genomes]
rs62530213	1.00[ASN][1000 genomes]
rs62530214	1.00[ASN][1000 genomes]
rs62530215	1.00[ASN][1000 genomes]
rs62530216	1.00[ASN][1000 genomes]
rs62530218	1.00[ASN][1000 genomes]
rs62530219	1.00[ASN][1000 genomes]
rs62530221	1.00[ASN][1000 genomes]
rs62530223	1.00[ASN][1000 genomes]
rs62530224	1.00[ASN][1000 genomes]
rs62530225	1.00[ASN][1000 genomes]
rs62530226	1.00[ASN][1000 genomes]
rs62530227	1.00[ASN][1000 genomes]
rs62530228	1.00[ASN][1000 genomes]
rs62530229	1.00[ASN][1000 genomes]
rs62530230	1.00[ASN][1000 genomes]
rs6983282	1.00[ASN][1000 genomes]
rs6985976	1.00[ASN][1000 genomes]
rs6986809	1.00[ASN][1000 genomes]
rs6996359	1.00[ASN][1000 genomes]
rs6996649	1.00[ASN][1000 genomes]
rs7000389	1.00[ASN][1000 genomes]
rs7001049	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs7002442	1.00[ASN][1000 genomes]
rs7002584	1.00[ASN][1000 genomes]
rs7002594	1.00[ASN][1000 genomes]
rs7007326	1.00[ASN][1000 genomes]
rs7016394	1.00[ASN][1000 genomes]
rs7016834	1.00[ASN][1000 genomes]
rs7016989	1.00[ASN][1000 genomes]
rs7017275	1.00[ASN][1000 genomes]
rs73317991	1.00[ASN][1000 genomes]
rs73317997	1.00[ASN][1000 genomes]
rs73317999	1.00[ASN][1000 genomes]
rs73318001	1.00[ASN][1000 genomes]
rs73319721	1.00[ASN][1000 genomes]
rs73319750	1.00[ASN][1000 genomes]
rs73319762	1.00[ASN][1000 genomes]
rs73319766	1.00[ASN][1000 genomes]
rs73319779	1.00[ASN][1000 genomes]
rs73319780	1.00[ASN][1000 genomes]
rs73319784	1.00[ASN][1000 genomes]
rs73319803	1.00[ASN][1000 genomes]
rs73321623	1.00[ASN][1000 genomes]
rs73321626	1.00[ASN][1000 genomes]
rs73321691	1.00[ASN][1000 genomes]
rs73321692	1.00[ASN][1000 genomes]
rs73321698	1.00[ASN][1000 genomes]
rs73321700	1.00[ASN][1000 genomes]
rs73323309	1.00[ASN][1000 genomes]
rs73323337	1.00[ASN][1000 genomes]
rs7819504	1.00[ASN][1000 genomes]
rs7819559	1.00[ASN][1000 genomes]
rs7837510	1.00[ASN][1000 genomes]
rs7837807	1.00[ASN][1000 genomes]
rs7837963	1.00[ASN][1000 genomes]
rs7843429	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7843626	1.00[ASN][1000 genomes]
rs923430	1.00[ASN][1000 genomes]
rs923431	1.00[ASN][1000 genomes]
rs923432	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1027659	chr8:111585843-111875753	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv831423	chr8:111672801-111869818	Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv1031245	chr8:111716585-111875753	Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv891294	chr8:111754075-112163801	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
5	nsv1032766	chr8:111779352-111995438	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
6	nsv1030494	chr8:111779352-112421812	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
7	esv2754849	chr8:111817591-112088992	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
8	nsv1033792	chr8:111824536-111906864	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
9	esv3418448	chr8:111834718-112112905	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:111835000-111842600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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