Variant report

Variant	rs10505336
Chromosome Location	chr8:119800978-119800979
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:119796339..119798562-chr8:119800667..119802730,2	MCF-7	breast:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs4410935	0.87[CEU][hapmap]
rs55880602	0.94[EUR][1000 genomes]
rs959454	0.87[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891414	chr8:119755490-119881550	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
2	nsv831444	chr8:119757355-119915966	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:119795600-119809200	Weak transcription	Aorta	Aorta
2	chr8:119799800-119801400	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr8:119800000-119801200	Enhancers	Hela-S3	cervix
4	chr8:119800000-119801400	Enhancers	ES-I3 Cell Line	embryonic stem cell
5	chr8:119800000-119801400	Enhancers	HUES6 Cell Line	embryonic stem cell
6	chr8:119800200-119801000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr8:119800200-119801000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr8:119800200-119801000	Enhancers	Muscle Satellite Cultured Cells	--
9	chr8:119800200-119801000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
10	chr8:119800200-119801200	Enhancers	H9 Cell Line	embryonic stem cell
11	chr8:119800200-119801200	Enhancers	HUES64 Cell Line	embryonic stem cell
12	chr8:119800200-119801200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr8:119800200-119801200	Enhancers	Primary monocytes fromperipheralblood	blood
14	chr8:119800200-119801400	Enhancers	H1 Cell Line	embryonic stem cell
15	chr8:119800200-119801400	Enhancers	HepG2	liver
16	chr8:119800200-119801400	Enhancers	Osteobl	bone
17	chr8:119800400-119801000	Enhancers	Fetal Intestine Large	intestine
18	chr8:119800400-119801200	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
19	chr8:119800400-119801200	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr8:119800400-119801400	Enhancers	iPS-18 Cell Line	embryonic stem cell
21	chr8:119800400-119801400	Enhancers	NHDF-Ad	bronchial
22	chr8:119800600-119801000	Enhancers	Monocytes-CD14+_RO01746	blood
23	chr8:119800800-119801400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
24	chr8:119800800-119801400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
25	chr8:119800800-119803600	Enhancers	HUES48 Cell Line	embryonic stem cell
26	chr8:119800800-119804600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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