Variant report

Variant	rs10507279
Chromosome Location	chr12:117780274-117780275
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs1004356	0.94[CEU][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11068451	0.93[CEU][hapmap];1.00[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs12811414	0.94[EUR][1000 genomes]
rs17431015	0.93[CEU][hapmap];1.00[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs3782218	0.88[CEU][hapmap];0.87[EUR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:117771600-117789000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr12:117773600-117782600	Weak transcription	Skeletal Muscle Male	skeletal muscle
3	chr12:117777200-117785400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr12:117777400-117785400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr12:117779800-117783400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr12:117780000-117782600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr12:117780000-117783800	Enhancers	NHEK	skin
8	chr12:117780200-117781200	Enhancers	HUVEC	blood vessel

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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