Variant report

Variant	rs12811414
Chromosome Location	chr12:117776085-117776086
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs1004356	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10507279	0.94[EUR][1000 genomes]
rs11068451	0.84[EUR][1000 genomes]
rs11068453	0.81[ASN][1000 genomes]
rs17431015	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3782218	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3814246	0.84[ASN][1000 genomes]
rs939473	0.84[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:117771600-117776600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr12:117771600-117776600	Weak transcription	A549	lung
3	chr12:117771600-117789000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr12:117771800-117776400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr12:117771800-117776600	Weak transcription	HUES64 Cell Line	embryonic stem cell
6	chr12:117772200-117776600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
7	chr12:117773200-117779800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr12:117773600-117780000	Weak transcription	NHEK	skin
9	chr12:117773600-117782600	Weak transcription	Skeletal Muscle Male	skeletal muscle
10	chr12:117776000-117776200	Enhancers	H1 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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