The 2.0 version of rSNPBase

Variant report

Variant rs10514912
Chromosome Location chr5:60920320-60920321
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60906600-60921400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr5:60906800-60921400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr5:60912400-60920800 Enhancers Brain Inferior Temporal Lobe brain
4 chr5:60912600-60920600 Enhancers Brain Substantia Nigra brain
5 chr5:60912800-60920800 Enhancers Brain Hippocampus Middle brain
6 chr5:60913000-60920800 Enhancers Brain Anterior Caudate brain
7 chr5:60914200-60921400 Weak transcription Aorta Aorta
8 chr5:60915400-60920800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
9 chr5:60915800-60920800 Weak transcription Esophagus oesophagus
10 chr5:60916200-60920800 Weak transcription Right Ventricle heart
11 chr5:60916200-60921000 Weak transcription Left Ventricle heart
12 chr5:60917000-60920600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr5:60917000-60920600 Weak transcription Rectal Smooth Muscle rectum
14 chr5:60917000-60920800 Weak transcription Colon Smooth Muscle Colon
15 chr5:60917000-60921000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr5:60917000-60921000 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr5:60917200-60920400 Weak transcription Fetal Lung lung
18 chr5:60917200-60920600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr5:60917200-60920800 Weak transcription Liver Liver
20 chr5:60917200-60921200 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr5:60917400-60920800 Weak transcription Adipose Nuclei Adipose
22 chr5:60917400-60920800 Weak transcription Fetal Stomach stomach
23 chr5:60917400-60920800 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr5:60917400-60921000 Weak transcription Fetal Brain Male brain
25 chr5:60917400-60921000 Weak transcription Right Atrium heart
26 chr5:60917400-60921600 Weak transcription Gastric stomach
27 chr5:60917600-60920400 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr5:60917600-60920800 Enhancers Brain Cingulate Gyrus brain
29 chr5:60917600-60920800 Weak transcription Fetal Muscle Trunk muscle
30 chr5:60917600-60921000 Weak transcription Ovary ovary
31 chr5:60917600-60921000 Weak transcription Pancreas Pancrea
32 chr5:60917600-60921000 Weak transcription Psoas Muscle Psoas
33 chr5:60917600-60921200 Weak transcription Lung lung
34 chr5:60918000-60920400 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr5:60918400-60920400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr5:60918400-60920800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr5:60918400-60921000 Weak transcription NH-A brain
38 chr5:60918600-60920600 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr5:60918600-60920800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr5:60918600-60921000 Weak transcription Stomach Smooth Muscle stomach
41 chr5:60918600-60921200 Weak transcription Osteobl bone
42 chr5:60919000-60920800 Enhancers A549 lung
43 chr5:60919000-60921200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr5:60919200-60921400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr5:60919400-60920400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr5:60919400-60920800 Weak transcription ES-I3 Cell Line embryonic stem cell
47 chr5:60919400-60921800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
48 chr5:60919600-60920800 Weak transcription HUES48 Cell Line embryonic stem cell
49 chr5:60919600-60920800 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr5:60919800-60920800 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015