Variant report

Variant rs16893072
Chromosome Location chr5:60921411-60921412
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60917400-60921600 Weak transcription Gastric stomach
2 chr5:60919400-60921800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
3 chr5:60920600-60922600 Active TSS Pancreatic Islets Pancreatic Islet
4 chr5:60920800-60921600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr5:60920800-60921600 Flanking Active TSS Brain Anterior Caudate brain
6 chr5:60920800-60921600 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
7 chr5:60920800-60921800 Flanking Active TSS Brain Germinal Matrix brain
8 chr5:60920800-60922400 Active TSS HUES6 Cell Line embryonic stem cell
9 chr5:60920800-60923000 Flanking Active TSS Brain Hippocampus Middle brain
10 chr5:60921000-60921600 Bivalent Enhancer Primary B cells from peripheral blood blood
11 chr5:60921000-60921600 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
12 chr5:60921000-60921800 Flanking Active TSS Fetal Brain Female brain
13 chr5:60921000-60922000 Active TSS ES-I3 Cell Line embryonic stem cell
14 chr5:60921000-60922000 Flanking Active TSS Cortex derived primary cultured neurospheres brain
15 chr5:60921000-60922000 Active TSS NHDF-Ad bronchial
16 chr5:60921000-60922200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr5:60921000-60922400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr5:60921000-60922400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
19 chr5:60921000-60922400 Enhancers Fetal Brain Male brain
20 chr5:60921000-60922400 Active TSS Fetal Kidney kidney
21 chr5:60921000-60922600 Active TSS H9 Cell Line embryonic stem cell
22 chr5:60921000-60922600 Active TSS Right Atrium heart
23 chr5:60921000-60922800 Flanking Active TSS Primary hematopoietic stem cells blood
24 chr5:60921000-60923200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr5:60921200-60921600 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr5:60921200-60921600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr5:60921200-60921600 Active TSS Colonic Mucosa Colon
28 chr5:60921200-60921600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
29 chr5:60921200-60921600 Flanking Bivalent TSS/Enh Monocytes-CD14+_RO01746 blood
30 chr5:60921200-60921600 Flanking Bivalent TSS/Enh NHEK skin
31 chr5:60921200-60921800 Flanking Active TSS Fetal Muscle Leg muscle
32 chr5:60921200-60921800 Flanking Active TSS Placenta Placenta
33 chr5:60921200-60921800 Flanking Active TSS Thymus Thymus
34 chr5:60921200-60922000 Flanking Bivalent TSS/Enh IMR90 fetal lung fibroblasts Cell Line lung
35 chr5:60921200-60922000 Active TSS Fetal Lung lung
36 chr5:60921200-60922000 Flanking Active TSS HMEC breast
37 chr5:60921200-60922000 Flanking Active TSS HUVEC blood vessel
38 chr5:60921200-60922200 Flanking Bivalent TSS/Enh Fetal Thymus thymus
39 chr5:60921200-60922200 Active TSS Ovary ovary
40 chr5:60921200-60922200 Active TSS A549 lung
41 chr5:60921200-60922400 Active TSS ES-WA7 Cell Line embryonic stem cell
42 chr5:60921200-60922400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr5:60921200-60922400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
44 chr5:60921200-60922400 Bivalent Enhancer Primary T helper memory cells from peripheral blood 1 blood
45 chr5:60921200-60922400 Active TSS Brain Inferior Temporal Lobe brain
46 chr5:60921200-60922400 Active TSS Left Ventricle heart
47 chr5:60921200-60922400 Active TSS Lung lung
48 chr5:60921200-60922400 Active TSS Pancreas Pancrea
49 chr5:60921200-60922400 Active TSS Placenta Amnion Placenta Amnion
50 chr5:60921200-60922400 Active TSS Psoas Muscle Psoas

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