The 2.0 version of rSNPBase

Variant report

Variant rs10518439
Chromosome Location chr4:125618182-125618183
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:125593000-125618200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr4:125593000-125621800 Weak transcription Fetal Stomach stomach
3 chr4:125593000-125631200 Weak transcription Esophagus oesophagus
4 chr4:125593400-125621800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr4:125593400-125629800 Weak transcription Aorta Aorta
6 chr4:125593400-125629800 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr4:125593400-125631200 Weak transcription Thymus Thymus
8 chr4:125593600-125629600 Weak transcription HSMMtube muscle
9 chr4:125593600-125631000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr4:125594200-125625400 Weak transcription Hela-S3 cervix
11 chr4:125594200-125631200 Weak transcription Fetal Thymus thymus
12 chr4:125597400-125631200 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr4:125599200-125627800 Weak transcription Placenta Placenta
14 chr4:125600000-125618200 Weak transcription Dnd41 blood
15 chr4:125600000-125618600 Weak transcription Fetal Brain Female brain
16 chr4:125601600-125621200 Weak transcription Fetal Heart heart
17 chr4:125606000-125624400 Weak transcription Fetal Brain Male brain
18 chr4:125606000-125631000 Weak transcription Placenta Amnion Placenta Amnion
19 chr4:125606200-125629600 Weak transcription K562 blood
20 chr4:125606400-125621800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr4:125607800-125621200 Weak transcription NH-A brain
22 chr4:125607800-125631200 Weak transcription Left Ventricle heart
23 chr4:125608000-125618600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr4:125608000-125621200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr4:125608200-125618200 Weak transcription HMEC breast
26 chr4:125608200-125621800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr4:125608200-125629800 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr4:125608400-125618600 Weak transcription Primary monocytes fromperipheralblood blood
29 chr4:125608400-125621400 Weak transcription Muscle Satellite Cultured Cells --
30 chr4:125609600-125618600 Weak transcription Brain Germinal Matrix brain
31 chr4:125610600-125621200 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr4:125611000-125618400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr4:125611000-125618800 Weak transcription Osteobl bone
34 chr4:125611400-125629800 Weak transcription Fetal Kidney kidney
35 chr4:125611600-125632400 Weak transcription Stomach Mucosa stomach
36 chr4:125612400-125618800 Weak transcription Fetal Muscle Trunk muscle
37 chr4:125613200-125618200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr4:125613400-125618600 Weak transcription Monocytes-CD14+_RO01746 blood
39 chr4:125614000-125619400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr4:125614200-125621200 Weak transcription HSMM muscle
41 chr4:125614400-125618800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr4:125614400-125621200 Weak transcription Primary hematopoietic stem cells blood
43 chr4:125615600-125618400 Genic enhancers HUVEC blood vessel
44 chr4:125616000-125618200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr4:125616000-125625000 Weak transcription Rectal Smooth Muscle rectum
46 chr4:125616000-125625400 Weak transcription Colon Smooth Muscle Colon
47 chr4:125616400-125619400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr4:125616600-125619000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr4:125616600-125631200 Weak transcription Lung lung
50 chr4:125616800-125618400 Weak transcription H1 Cell Line embryonic stem cell

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Last update: Aug 31, 2015