The 2.0 version of rSNPBase

Variant report

Variant rs10519644
Chromosome Location chr4:143286268-143286269
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:143273400-143299000 Weak transcription Left Ventricle heart
2 chr4:143274800-143288800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr4:143275400-143288000 Weak transcription Aorta Aorta
4 chr4:143276200-143289800 Weak transcription Duodenum Mucosa Duodenum
5 chr4:143277000-143288000 Weak transcription Primary hematopoietic stem cells blood
6 chr4:143277000-143288000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr4:143277200-143288000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr4:143277800-143289800 Enhancers Primary T helper naive cells from peripheral blood blood
9 chr4:143278400-143294200 Weak transcription Stomach Mucosa stomach
10 chr4:143280600-143287600 Weak transcription Fetal Heart heart
11 chr4:143282400-143286800 Weak transcription Primary T regulatory cells fromperipheralblood blood
12 chr4:143284000-143288000 Weak transcription Primary T cells from cord blood blood
13 chr4:143284200-143286600 Weak transcription NHEK skin
14 chr4:143284200-143288000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr4:143284400-143286600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr4:143284800-143286800 Enhancers HSMMtube muscle
17 chr4:143284800-143289400 Enhancers HSMM muscle
18 chr4:143285000-143288200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
19 chr4:143285000-143294600 Enhancers Primary T killer naive cells fromperipheralblood blood
20 chr4:143285200-143286400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr4:143285200-143288000 Weak transcription A549 lung
22 chr4:143285200-143288600 Enhancers Primary T killer memory cells from peripheral blood blood
23 chr4:143285200-143290200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr4:143285200-143298400 Enhancers Primary T helper cells fromperipheralblood blood
25 chr4:143285800-143286400 Enhancers HUES48 Cell Line embryonic stem cell
26 chr4:143285800-143286800 Enhancers Primary T helper 17 cells PMA-I stimulated --
27 chr4:143285800-143287200 Enhancers Cortex derived primary cultured neurospheres brain
28 chr4:143285800-143288000 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr4:143285800-143288600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
30 chr4:143285800-143288800 Enhancers Primary T helper naive cells fromperipheralblood blood
31 chr4:143285800-143289000 Weak transcription Dnd41 blood
32 chr4:143285800-143289200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
33 chr4:143285800-143290000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
34 chr4:143285800-143290400 Enhancers NHDF-Ad bronchial
35 chr4:143286000-143286400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
36 chr4:143286000-143286800 Enhancers H1 Cell Line embryonic stem cell
37 chr4:143286000-143286800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr4:143286000-143286800 Enhancers HUES6 Cell Line embryonic stem cell
39 chr4:143286000-143286800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
40 chr4:143286000-143286800 Enhancers iPS-18 Cell Line embryonic stem cell
41 chr4:143286000-143286800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
42 chr4:143286000-143286800 Enhancers Brain Cingulate Gyrus brain
43 chr4:143286000-143288200 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr4:143286000-143288800 Enhancers HUES64 Cell Line embryonic stem cell
45 chr4:143286000-143289200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr4:143286000-143290600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr4:143286200-143286400 Enhancers Brain Germinal Matrix brain
48 chr4:143286200-143286400 Enhancers NH-A brain
49 chr4:143286200-143286600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
50 chr4:143286200-143286800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015