The 2.0 version of rSNPBase

Variant report

Variant rs60684776
Chromosome Location chr4:143273310-143273311
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:143258000-143274800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr4:143258200-143274000 Weak transcription Dnd41 blood
3 chr4:143264000-143275400 Enhancers Primary T helper naive cells from peripheral blood blood
4 chr4:143264600-143274400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
5 chr4:143265800-143280600 Enhancers Primary T killer naive cells fromperipheralblood blood
6 chr4:143268400-143283200 Enhancers Primary T helper cells fromperipheralblood blood
7 chr4:143268600-143273800 Enhancers Primary T helper 17 cells PMA-I stimulated --
8 chr4:143268600-143274000 Enhancers Primary T helper naive cells fromperipheralblood blood
9 chr4:143268600-143274000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
10 chr4:143269000-143273400 Enhancers Primary T regulatory cells fromperipheralblood blood
11 chr4:143269400-143278600 Enhancers Fetal Heart heart
12 chr4:143270000-143274200 Weak transcription NHEK skin
13 chr4:143270000-143274600 Weak transcription Ovary ovary
14 chr4:143270200-143274200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr4:143270200-143274400 Weak transcription Primary T cells fromperipheralblood blood
16 chr4:143270200-143275200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr4:143270200-143275200 Weak transcription Psoas Muscle Psoas
18 chr4:143270200-143275800 Weak transcription Duodenum Mucosa Duodenum
19 chr4:143270400-143274600 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr4:143270600-143274000 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr4:143270800-143284000 Enhancers Primary T killer memory cells from peripheral blood blood
22 chr4:143271000-143277200 Enhancers Fetal Lung lung
23 chr4:143271200-143275600 Enhancers HSMMtube muscle
24 chr4:143271200-143276800 Enhancers Skeletal Muscle Male skeletal muscle
25 chr4:143271800-143275400 Enhancers Cortex derived primary cultured neurospheres brain
26 chr4:143272000-143273400 Enhancers Primary hematopoietic stem cells short term culture blood
27 chr4:143272000-143273400 Enhancers Fetal Intestine Small intestine
28 chr4:143272000-143277000 Enhancers Duodenum Smooth Muscle Duodenum
29 chr4:143272200-143273400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
30 chr4:143272200-143274000 Enhancers HMEC breast
31 chr4:143272400-143273800 Weak transcription Muscle Satellite Cultured Cells --
32 chr4:143272400-143274000 Weak transcription Primary T cells from cord blood blood
33 chr4:143272400-143274000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr4:143272400-143274000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr4:143272400-143274000 Weak transcription Osteobl bone
36 chr4:143272400-143274200 Weak transcription Pancreatic Islets Pancreatic Islet
37 chr4:143272400-143274600 Weak transcription Fetal Muscle Leg muscle
38 chr4:143272400-143275800 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr4:143272400-143276000 Weak transcription Adipose Nuclei Adipose
40 chr4:143272400-143278200 Weak transcription Brain Cingulate Gyrus brain
41 chr4:143272400-143279800 Weak transcription Right Ventricle heart
42 chr4:143272600-143273400 Enhancers Brain Germinal Matrix brain
43 chr4:143272600-143273800 Weak transcription Brain Angular Gyrus brain
44 chr4:143272600-143274000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr4:143272600-143274000 Weak transcription Fetal Intestine Large intestine
46 chr4:143272600-143274000 Weak transcription Skeletal Muscle Female skeletal muscle
47 chr4:143272600-143274400 Weak transcription Stomach Mucosa stomach
48 chr4:143272600-143276000 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr4:143272600-143276200 Weak transcription Small Intestine intestine
50 chr4:143272800-143273600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015