Variant report

Variant rs1053651
Chromosome Location chr17:37822311-37822312
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:37795000-37823800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr17:37817000-37823000 Weak transcription GM12878-XiMat blood
3 chr17:37817600-37823400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr17:37818200-37823000 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr17:37818400-37823600 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr17:37819200-37825200 Enhancers Liver Liver
7 chr17:37819400-37822600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr17:37819400-37823000 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr17:37819400-37823200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
10 chr17:37819400-37823200 Weak transcription Primary B cells from peripheral blood blood
11 chr17:37819400-37823600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
12 chr17:37819600-37822400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr17:37819600-37822800 Weak transcription Primary T cells from cord blood blood
14 chr17:37819600-37823400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr17:37819600-37823800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr17:37819600-37824200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr17:37819800-37822600 Weak transcription Dnd41 blood
18 chr17:37819800-37823000 Enhancers Brain Anterior Caudate brain
19 chr17:37820000-37822600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
20 chr17:37820400-37823000 Enhancers Brain Hippocampus Middle brain
21 chr17:37820400-37825200 Enhancers Brain Angular Gyrus brain
22 chr17:37820600-37822800 Weak transcription Primary hematopoietic stem cells blood
23 chr17:37820600-37823000 Enhancers K562 blood
24 chr17:37820600-37823200 Enhancers A549 lung
25 chr17:37820600-37823400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr17:37820600-37824000 Enhancers HSMMtube muscle
27 chr17:37820800-37822600 Weak transcription Hela-S3 cervix
28 chr17:37820800-37822800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr17:37820800-37823000 Weak transcription Fetal Brain Female brain
30 chr17:37820800-37823000 Active TSS Right Atrium heart
31 chr17:37820800-37823400 Active TSS Left Ventricle heart
32 chr17:37821000-37822400 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr17:37821000-37823200 Enhancers Brain Inferior Temporal Lobe brain
34 chr17:37821000-37823600 Enhancers Fetal Brain Male brain
35 chr17:37821000-37823800 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
36 chr17:37821000-37824400 Bivalent Enhancer Stomach Smooth Muscle stomach
37 chr17:37821200-37822400 Weak transcription H9 Cell Line embryonic stem cell
38 chr17:37821200-37823400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
39 chr17:37821200-37824600 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
40 chr17:37821600-37822600 Active TSS Fetal Heart heart
41 chr17:37821600-37822600 Enhancers Fetal Lung lung
42 chr17:37821600-37823000 Enhancers HSMM muscle
43 chr17:37821600-37823600 Transcr. at gene 5' and 3' Skeletal Muscle Male skeletal muscle
44 chr17:37821600-37824000 Bivalent Enhancer Brain Germinal Matrix brain
45 chr17:37821600-37824600 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
46 chr17:37821800-37822400 Bivalent Enhancer Fetal Stomach stomach
47 chr17:37821800-37822400 Flanking Active TSS Right Ventricle heart
48 chr17:37821800-37823400 Enhancers Cortex derived primary cultured neurospheres brain
49 chr17:37821800-37823400 Bivalent Enhancer HepG2 liver
50 chr17:37821800-37823600 Enhancers Placenta Amnion Placenta Amnion

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