Variant report

Variant rs1054277
Chromosome Location chr12:24968131-24968132
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:24956600-24969600 Weak transcription Pancreas Pancrea
2 chr12:24960400-24975200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr12:24961800-24969600 Weak transcription NHLF lung
4 chr12:24963800-24970000 Weak transcription HSMMtube muscle
5 chr12:24964000-24968400 Weak transcription NH-A brain
6 chr12:24964000-25013400 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr12:24964400-24973600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr12:24964600-24968200 Weak transcription Brain Germinal Matrix brain
9 chr12:24965200-24969800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr12:24965200-24976800 Weak transcription Lung lung
11 chr12:24965200-24989800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr12:24965400-24968400 Strong transcription HSMM muscle
13 chr12:24965600-24986800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr12:24965600-24989400 Strong transcription iPS-18 Cell Line embryonic stem cell
15 chr12:24965600-25004800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr12:24965800-24971000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr12:24965800-24974200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr12:24965800-24989800 Strong transcription HUES64 Cell Line embryonic stem cell
19 chr12:24966200-24973600 Weak transcription Muscle Satellite Cultured Cells --
20 chr12:24966200-24974800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr12:24966200-24987800 Strong transcription HUES48 Cell Line embryonic stem cell
22 chr12:24966200-24989600 Strong transcription iPS-20b Cell Line embryonic stem cell
23 chr12:24966200-25002000 Weak transcription HepG2 liver
24 chr12:24966400-24969200 Strong transcription HUVEC blood vessel
25 chr12:24966800-24968400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
26 chr12:24967000-24968200 Flanking Active TSS Primary B cells from cord blood blood
27 chr12:24967000-24968200 Enhancers Fetal Lung lung
28 chr12:24967000-24968400 Enhancers Primary T helper 17 cells PMA-I stimulated --
29 chr12:24967000-24989600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr12:24967200-24968200 Weak transcription Placenta Amnion Placenta Amnion
31 chr12:24967200-24968600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr12:24967200-24968800 Weak transcription H9 Cell Line embryonic stem cell
33 chr12:24967200-24969400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr12:24967200-24969600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr12:24967400-24968200 Flanking Active TSS Primary monocytes fromperipheralblood blood
36 chr12:24967400-24968200 Active TSS Primary B cells from peripheral blood blood
37 chr12:24967400-24968200 Active TSS Primary T cells fromperipheralblood blood
38 chr12:24967400-24968200 Active TSS Primary T helper naive cells from peripheral blood blood
39 chr12:24967400-24968200 Active TSS Primary T regulatory cells fromperipheralblood blood
40 chr12:24967400-24968200 Active TSS Primary Natural Killer cells fromperipheralblood blood
41 chr12:24967400-24968200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr12:24967400-24968200 Active TSS Duodenum Mucosa Duodenum
43 chr12:24967400-24968400 Active TSS Rectal Mucosa Donor 31 rectum
44 chr12:24967400-24968600 Active TSS Rectal Mucosa Donor 29 rectum
45 chr12:24967400-24974800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr12:24967600-24968200 Flanking Active TSS Primary hematopoietic stem cells blood
47 chr12:24967600-24968200 Active TSS Primary T helper cells PMA-I stimulated --
48 chr12:24967600-24968200 Active TSS Primary T helper cells fromperipheralblood blood
49 chr12:24967600-24968200 Active TSS Liver Liver
50 chr12:24967600-24968200 Active TSS Fetal Kidney kidney

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