Variant report

Variant rs3198082
Chromosome Location chr12:24969363-24969364
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:24956600-24969600 Weak transcription Pancreas Pancrea
2 chr12:24960400-24975200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr12:24961800-24969600 Weak transcription NHLF lung
4 chr12:24963800-24970000 Weak transcription HSMMtube muscle
5 chr12:24964000-25013400 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr12:24964400-24973600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr12:24965200-24969800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr12:24965200-24976800 Weak transcription Lung lung
9 chr12:24965200-24989800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr12:24965600-24986800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr12:24965600-24989400 Strong transcription iPS-18 Cell Line embryonic stem cell
12 chr12:24965600-25004800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr12:24965800-24971000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr12:24965800-24974200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr12:24965800-24989800 Strong transcription HUES64 Cell Line embryonic stem cell
16 chr12:24966200-24973600 Weak transcription Muscle Satellite Cultured Cells --
17 chr12:24966200-24974800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr12:24966200-24987800 Strong transcription HUES48 Cell Line embryonic stem cell
19 chr12:24966200-24989600 Strong transcription iPS-20b Cell Line embryonic stem cell
20 chr12:24966200-25002000 Weak transcription HepG2 liver
21 chr12:24967000-24989600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr12:24967200-24969400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr12:24967200-24969600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr12:24967400-24974800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr12:24967600-24971000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr12:24967600-24971200 Strong transcription HUES6 Cell Line embryonic stem cell
27 chr12:24967600-24977800 Strong transcription H1 Cell Line embryonic stem cell
28 chr12:24967800-24970800 Strong transcription Osteobl bone
29 chr12:24967800-24989000 Weak transcription Aorta Aorta
30 chr12:24968000-24969600 Weak transcription Fetal Muscle Leg muscle
31 chr12:24968000-24973400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr12:24968000-24974000 Weak transcription NHEK skin
33 chr12:24968000-24974200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr12:24968000-24976400 Strong transcription K562 blood
35 chr12:24968000-24990800 Weak transcription Brain Hippocampus Middle brain
36 chr12:24968000-25017600 Weak transcription Fetal Thymus thymus
37 chr12:24968200-24972200 Strong transcription Placenta Amnion Placenta Amnion
38 chr12:24968200-24973400 Weak transcription Fetal Muscle Trunk muscle
39 chr12:24968200-24973600 Weak transcription Ovary ovary
40 chr12:24968200-24985000 Weak transcription Fetal Lung lung
41 chr12:24968200-24986800 Weak transcription Thymus Thymus
42 chr12:24968400-24969600 Weak transcription HSMM muscle
43 chr12:24968400-24972800 Strong transcription NH-A brain
44 chr12:24968400-24983600 Weak transcription Fetal Kidney kidney
45 chr12:24968400-25007800 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr12:24968600-24969600 Weak transcription Primary hematopoietic stem cells blood
47 chr12:24968600-24969600 Weak transcription Dnd41 blood
48 chr12:24968600-24974800 Weak transcription Small Intestine intestine
49 chr12:24968600-24980600 Weak transcription Fetal Brain Female brain
50 chr12:24968800-24969400 Weak transcription Primary hematopoietic stem cells short term culture blood

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