Variant report

Variant rs1055199
Chromosome Location chr2:128396059-128396060
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:128387400-128396400 Enhancers Placenta Placenta
2 chr2:128390000-128397200 Enhancers Primary T helper naive cells from peripheral blood blood
3 chr2:128390800-128398400 Genic enhancers Fetal Intestine Small intestine
4 chr2:128391400-128396200 Genic enhancers Spleen Spleen
5 chr2:128391600-128397200 Genic enhancers Fetal Intestine Large intestine
6 chr2:128392000-128396600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
7 chr2:128392000-128397400 Weak transcription Brain Angular Gyrus brain
8 chr2:128392000-128397400 Weak transcription GM12878-XiMat blood
9 chr2:128392000-128403000 Weak transcription Brain Germinal Matrix brain
10 chr2:128392200-128397400 Weak transcription Brain Inferior Temporal Lobe brain
11 chr2:128392200-128400400 Weak transcription Brain Substantia Nigra brain
12 chr2:128392400-128402000 Genic enhancers Right Ventricle heart
13 chr2:128392600-128400800 Enhancers Primary B cells from peripheral blood blood
14 chr2:128392800-128399000 Enhancers Primary T killer naive cells fromperipheralblood blood
15 chr2:128393200-128400000 Enhancers Primary Natural Killer cells fromperipheralblood blood
16 chr2:128393400-128396600 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
17 chr2:128393400-128397400 Enhancers Primary T helper 17 cells PMA-I stimulated --
18 chr2:128393600-128396200 Enhancers Left Ventricle heart
19 chr2:128393600-128396600 Genic enhancers Colonic Mucosa Colon
20 chr2:128393600-128398800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
21 chr2:128393800-128397000 Enhancers Primary monocytes fromperipheralblood blood
22 chr2:128393800-128400800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr2:128394000-128396200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr2:128394200-128396200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr2:128394200-128396400 Enhancers Lung lung
26 chr2:128394200-128401200 Enhancers Primary hematopoietic stem cells short term culture blood
27 chr2:128394400-128396400 Enhancers HMEC breast
28 chr2:128394400-128396800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr2:128394400-128400000 Enhancers Primary hematopoietic stem cells blood
30 chr2:128394600-128396200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr2:128394600-128396200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr2:128394600-128396200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr2:128394600-128396400 Enhancers Thymus Thymus
34 chr2:128394600-128396600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
35 chr2:128394600-128399200 Transcr. at gene 5' and 3' Dnd41 blood
36 chr2:128394800-128396200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr2:128394800-128396200 Enhancers Skeletal Muscle Female skeletal muscle
38 chr2:128394800-128396400 Enhancers HUES48 Cell Line embryonic stem cell
39 chr2:128394800-128396400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
40 chr2:128394800-128396400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr2:128394800-128396400 Enhancers Stomach Mucosa stomach
42 chr2:128394800-128396400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
43 chr2:128394800-128396600 Enhancers H1 Cell Line embryonic stem cell
44 chr2:128394800-128398800 Enhancers Primary mononuclear cells fromperipheralblood Blood
45 chr2:128394800-128403000 Enhancers Fetal Heart heart
46 chr2:128395000-128396200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
47 chr2:128395000-128396200 Weak transcription Liver Liver
48 chr2:128395000-128397600 Flanking Active TSS Primary neutrophils fromperipheralblood blood
49 chr2:128395000-128407000 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr2:128395200-128396400 Flanking Active TSS HUES6 Cell Line embryonic stem cell

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