Variant report

Variant rs2288657
Chromosome Location chr2:128395498-128395499
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:128386200-128396000 Enhancers Fetal Thymus thymus
2 chr2:128386400-128395600 Enhancers Primary B cells from cord blood blood
3 chr2:128387400-128396400 Enhancers Placenta Placenta
4 chr2:128390000-128397200 Enhancers Primary T helper naive cells from peripheral blood blood
5 chr2:128390800-128398400 Genic enhancers Fetal Intestine Small intestine
6 chr2:128391200-128395600 Enhancers Fetal Muscle Trunk muscle
7 chr2:128391400-128396200 Genic enhancers Spleen Spleen
8 chr2:128391600-128397200 Genic enhancers Fetal Intestine Large intestine
9 chr2:128392000-128396600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
10 chr2:128392000-128397400 Weak transcription Brain Angular Gyrus brain
11 chr2:128392000-128397400 Weak transcription GM12878-XiMat blood
12 chr2:128392000-128403000 Weak transcription Brain Germinal Matrix brain
13 chr2:128392200-128395600 Weak transcription H9 Cell Line embryonic stem cell
14 chr2:128392200-128395600 Weak transcription Brain Cingulate Gyrus brain
15 chr2:128392200-128397400 Weak transcription Brain Inferior Temporal Lobe brain
16 chr2:128392200-128400400 Weak transcription Brain Substantia Nigra brain
17 chr2:128392400-128402000 Genic enhancers Right Ventricle heart
18 chr2:128392600-128400800 Enhancers Primary B cells from peripheral blood blood
19 chr2:128392800-128399000 Enhancers Primary T killer naive cells fromperipheralblood blood
20 chr2:128393000-128396000 Enhancers Right Atrium heart
21 chr2:128393200-128400000 Enhancers Primary Natural Killer cells fromperipheralblood blood
22 chr2:128393400-128395800 Enhancers Placenta Amnion Placenta Amnion
23 chr2:128393400-128396600 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
24 chr2:128393400-128397400 Enhancers Primary T helper 17 cells PMA-I stimulated --
25 chr2:128393600-128396000 Genic enhancers Sigmoid Colon Sigmoid Colon
26 chr2:128393600-128396200 Enhancers Left Ventricle heart
27 chr2:128393600-128396600 Genic enhancers Colonic Mucosa Colon
28 chr2:128393600-128398800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
29 chr2:128393800-128397000 Enhancers Primary monocytes fromperipheralblood blood
30 chr2:128393800-128400800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr2:128394000-128395800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
32 chr2:128394000-128396000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr2:128394000-128396000 Enhancers Fetal Muscle Leg muscle
34 chr2:128394000-128396000 Enhancers NHEK skin
35 chr2:128394000-128396200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr2:128394200-128396000 Enhancers HSMMtube muscle
37 chr2:128394200-128396200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr2:128394200-128396400 Enhancers Lung lung
39 chr2:128394200-128401200 Enhancers Primary hematopoietic stem cells short term culture blood
40 chr2:128394400-128395600 Enhancers ES-I3 Cell Line embryonic stem cell
41 chr2:128394400-128395600 Enhancers ES-WA7 Cell Line embryonic stem cell
42 chr2:128394400-128395600 Enhancers Gastric stomach
43 chr2:128394400-128396000 Genic enhancers Rectal Mucosa Donor 29 rectum
44 chr2:128394400-128396400 Enhancers HMEC breast
45 chr2:128394400-128396800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr2:128394400-128400000 Enhancers Primary hematopoietic stem cells blood
47 chr2:128394600-128395600 Enhancers iPS-20b Cell Line embryonic stem cell
48 chr2:128394600-128395800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
49 chr2:128394600-128395800 Enhancers NHLF lung
50 chr2:128394600-128396000 Enhancers NH-A brain

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