Variant report

(count:3 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	REST	chr15:75117720-75120534	HL-60	blood:	n/a	n/a
2	REST	chr15:75117536-75118066	U87	brain:	n/a	n/a
3	REST	chr15:75117828-75118100	PFSK-1	brain:	n/a	n/a

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:75074126..75076948-chr15:75116903..75120530,4	MCF-7	breast:
2	chr15:75111167..75114133-chr15:75116068..75118230,2	K562	blood:
3	chr15:75117625..75119967-chr15:75247068..75249643,2	K562	blood:
4	chr15:75115096..75116793-chr15:75116936..75121281,3	K562	blood:
5	chr15:75115272..75120114-chr15:75130983..75135707,7	K562	blood:
6	chr15:75116359..75118172-chr15:75182130..75184765,2	MCF-7	breast:
7	chr15:75072740..75076753-chr15:75116483..75119304,4	MCF-7	breast:
8	chr15:75116807..75119405-chr15:75229123..75231541,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-LMAN1L-1	chr15:75117814-75118095	NONHSAT047272

No data

rSNPs within LD-proxies of this variant (count:8)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv904380	chr15:74869438-75142761	Flanking Active TSS Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
2	nsv833055	chr15:74988344-75166288	Weak transcription Active TSS Genic enhancers Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
3	nsv520527	chr15:75108636-75122856	Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
4	nsv904381	chr15:75108636-75242155	Weak transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	55 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:75111400-75128000	Weak transcription	Gastric	stomach
2	chr15:75113600-75118600	Weak transcription	Right Atrium	heart
3	chr15:75114400-75118200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr15:75116800-75118000	Enhancers	Brain Anterior Caudate	brain
5	chr15:75117800-75118200	Flanking Active TSS	Spleen	Spleen

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