| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1028607 |
chr6:79853272-80767716 |
Enhancers Active TSS Genic enhancers Flanking Active TSS Strong transcription Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
43 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1032347 |
chr6:80284809-80694778 |
Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
15 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1021143 |
chr6:80400195-80598163 |
Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
5 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
esv3693359 |
chr6:80539454-80606537 |
Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
esv3472875 |
chr6:80556985-80570535 |
Enhancers Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
esv3472876 |
chr6:80557009-80570482 |
Weak transcription Enhancers
|
TF binding regionChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
esv3472877 |
chr6:80557030-80570514 |
Enhancers Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv823758 |
chr6:80557087-80570336 |
Enhancers Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
esv3472878 |
chr6:80557133-80570429 |
Enhancers Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
esv3377988 |
chr6:80563869-80564193 |
Weak transcription
|
TF binding region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
esv2644945 |
chr6:80564142-80564143 |
Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 12 |
esv2190063 |
chr6:80564142-80564144 |
Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 13 |
esv1703348 |
chr6:80564143-80564145 |
Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page:
1
