Variant report

Variant	rs10736247
Chromosome Location	chr10:118013786-118013787
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs7088385	0.82[AFR][1000 genomes]
rs7908458	0.85[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3449389	chr10:117806874-118102404	Active TSS Enhancers Bivalent Enhancer Strong transcription Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv832000	chr10:117944492-118116253	Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv1043339	chr10:118010822-118025492	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:118008000-118014000	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr10:118008600-118014000	Weak transcription	Fetal Stomach	stomach
3	chr10:118011000-118014000	Weak transcription	Fetal Lung	lung
4	chr10:118011200-118015200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr10:118011400-118014400	Weak transcription	Brain Anterior Caudate	brain
6	chr10:118012000-118014400	Weak transcription	Stomach Smooth Muscle	stomach
7	chr10:118012200-118015600	Weak transcription	Duodenum Smooth Muscle	Duodenum
8	chr10:118012200-118016800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr10:118012400-118015000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr10:118012400-118015800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr10:118012800-118015200	Weak transcription	Fetal Muscle Trunk	muscle
12	chr10:118013000-118017200	Enhancers	Fetal Muscle Leg	muscle
13	chr10:118013200-118014000	Enhancers	HSMMtube	muscle
14	chr10:118013200-118016400	Enhancers	Brain Germinal Matrix	brain
15	chr10:118013200-118017600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr10:118013400-118014800	Enhancers	Liver	Liver
17	chr10:118013400-118016200	Enhancers	HSMM	muscle
18	chr10:118013400-118016400	Enhancers	Ovary	ovary
19	chr10:118013600-118014000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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