Variant report

Variant	rs10736732
Chromosome Location	chr11:64267257-64267258
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10751011	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12272361	1.00[EUR][1000 genomes]
rs4930400	1.00[EUR][1000 genomes]
rs61885698	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61885700	1.00[EUR][1000 genomes]
rs6591856	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7112387	1.00[EUR][1000 genomes]
rs7115332	1.00[EUR][1000 genomes]
rs73490282	1.00[EUR][1000 genomes]
rs73490294	1.00[EUR][1000 genomes]
rs7944545	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832187	chr11:64121969-64312300	Genic enhancers Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
2	nsv1035485	chr11:64228847-64354869	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:64265000-64268000	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr11:64265400-64269200	Enhancers	Primary hematopoietic stem cells short term culture	blood
3	chr11:64265800-64267600	Enhancers	Fetal Thymus	thymus
4	chr11:64265800-64268200	Enhancers	Primary hematopoietic stem cells	blood
5	chr11:64266000-64267400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
6	chr11:64266000-64271600	Weak transcription	Spleen	Spleen
7	chr11:64266800-64267400	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
8	chr11:64266800-64267400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
9	chr11:64266800-64268000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr11:64266800-64269200	Enhancers	Rectal Mucosa Donor 31	rectum
11	chr11:64267000-64267400	Flanking Active TSS	K562	blood
12	chr11:64267000-64268000	Enhancers	Sigmoid Colon	Sigmoid Colon
13	chr11:64267200-64267400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr11:64267200-64267400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr11:64267200-64267400	Enhancers	Pancreas	Pancrea
16	chr11:64267200-64267800	Enhancers	HMEC	breast

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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