Variant report

Variant rs10741718
Chromosome Location chr11:17019073-17019074
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:17004800-17034200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr11:17006400-17034000 Weak transcription Brain Cingulate Gyrus brain
3 chr11:17009400-17032600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr11:17009800-17030000 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr11:17009800-17032600 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr11:17009800-17032600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr11:17010000-17023000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr11:17012400-17024200 Enhancers Stomach Mucosa stomach
9 chr11:17013400-17033800 Weak transcription Brain Substantia Nigra brain
10 chr11:17014000-17023400 Weak transcription Fetal Stomach stomach
11 chr11:17014000-17025000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr11:17014200-17019200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr11:17014200-17021200 Genic enhancers Fetal Intestine Small intestine
14 chr11:17014200-17021400 Enhancers Fetal Intestine Large intestine
15 chr11:17014600-17021000 Enhancers Pancreas Pancrea
16 chr11:17015000-17024800 Enhancers Gastric stomach
17 chr11:17016000-17022600 Weak transcription Esophagus oesophagus
18 chr11:17016400-17019400 Enhancers Adipose Nuclei Adipose
19 chr11:17016400-17034600 Weak transcription Aorta Aorta
20 chr11:17016600-17030800 Weak transcription Fetal Kidney kidney
21 chr11:17017200-17019200 Enhancers Fetal Heart heart
22 chr11:17017400-17019600 Enhancers Skeletal Muscle Male skeletal muscle
23 chr11:17017400-17019800 Enhancers Psoas Muscle Psoas
24 chr11:17017400-17019800 Enhancers Right Ventricle heart
25 chr11:17017600-17019600 Enhancers Skeletal Muscle Female skeletal muscle
26 chr11:17017600-17020000 Enhancers Left Ventricle heart
27 chr11:17017800-17019400 Enhancers Lung lung
28 chr11:17017800-17021200 Enhancers Right Atrium heart
29 chr11:17018000-17019200 Enhancers Spleen Spleen
30 chr11:17018000-17020400 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr11:17018000-17028000 Weak transcription Stomach Smooth Muscle stomach
32 chr11:17018000-17029400 Weak transcription Brain Anterior Caudate brain
33 chr11:17018400-17020000 Enhancers Small Intestine intestine
34 chr11:17018400-17021200 Enhancers Sigmoid Colon Sigmoid Colon
35 chr11:17018600-17019400 Flanking Active TSS Colonic Mucosa Colon
36 chr11:17018600-17019400 Flanking Active TSS Duodenum Mucosa Duodenum
37 chr11:17018600-17019800 Flanking Active TSS Rectal Mucosa Donor 29 rectum
38 chr11:17018800-17019200 Strong transcription A549 lung
39 chr11:17018800-17032000 Weak transcription Fetal Muscle Leg muscle
40 chr11:17019000-17019200 Enhancers HepG2 liver
41 chr11:17019000-17019400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr11:17019000-17019600 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr11:17019000-17019600 Flanking Active TSS Liver Liver
44 chr11:17019000-17019600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
45 chr11:17019000-17032600 Weak transcription H1 Cell Line embryonic stem cell

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