Variant report

Variant	rs10751223
Chromosome Location	chr11:72628180-72628181
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs1025411	1.00[YRI][hapmap]
rs10736787	1.00[YRI][hapmap]
rs10736789	1.00[YRI][hapmap]
rs10751220	1.00[YRI][hapmap]
rs10751221	1.00[YRI][hapmap]
rs1367698	1.00[YRI][hapmap]
rs1982038	1.00[YRI][hapmap]
rs2365906	1.00[YRI][hapmap]
rs2365907	1.00[YRI][hapmap]
rs3903492	1.00[YRI][hapmap]
rs4329714	1.00[YRI][hapmap]
rs4594026	1.00[YRI][hapmap]
rs4643105	1.00[YRI][hapmap]
rs479093	1.00[YRI][hapmap]
rs4944015	1.00[YRI][hapmap]
rs4944017	1.00[YRI][hapmap]
rs4944799	1.00[YRI][hapmap]
rs4944812	1.00[YRI][hapmap]
rs4944817	1.00[YRI][hapmap]
rs537980	1.00[YRI][hapmap]
rs560258	1.00[YRI][hapmap]
rs640283	1.00[YRI][hapmap]
rs6592492	1.00[YRI][hapmap]
rs671766	1.00[YRI][hapmap]
rs7101936	1.00[YRI][hapmap]
rs7122570	1.00[YRI][hapmap]
rs7129851	1.00[YRI][hapmap]
rs7937866	1.00[YRI][hapmap]
rs7948244	1.00[YRI][hapmap]
rs7950432	1.00[YRI][hapmap]
rs994305	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3394774	chr11:72320884-72694077	Genic enhancers Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	73 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:58 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:72577200-72651600	Weak transcription	Gastric	stomach
2	chr11:72597200-72634200	Weak transcription	NHLF	lung
3	chr11:72599400-72632400	Weak transcription	HUVEC	blood vessel
4	chr11:72600800-72632600	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr11:72600800-72653200	Weak transcription	Lung	lung
6	chr11:72601000-72636800	Weak transcription	Spleen	Spleen
7	chr11:72601000-72641200	Weak transcription	HSMMtube	muscle
8	chr11:72601200-72636000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
9	chr11:72601400-72632400	Weak transcription	Ovary	ovary
10	chr11:72601800-72636000	Weak transcription	Osteobl	bone
11	chr11:72602200-72636800	Weak transcription	Left Ventricle	heart
12	chr11:72607000-72643000	Weak transcription	HSMM	muscle
13	chr11:72612400-72649000	Weak transcription	Aorta	Aorta
14	chr11:72614200-72640400	Weak transcription	Rectal Mucosa Donor 29	rectum
15	chr11:72615800-72631400	Weak transcription	Liver	Liver
16	chr11:72618400-72636000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
17	chr11:72619600-72641400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
18	chr11:72620200-72636800	Weak transcription	Right Atrium	heart
19	chr11:72621000-72651000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr11:72623600-72632000	Weak transcription	Duodenum Smooth Muscle	Duodenum
21	chr11:72623600-72643400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
22	chr11:72623800-72636800	Weak transcription	Psoas Muscle	Psoas
23	chr11:72624000-72632000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
24	chr11:72624200-72631800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
25	chr11:72624200-72654400	Weak transcription	Duodenum Mucosa	Duodenum
26	chr11:72624400-72631200	Weak transcription	Dnd41	blood
27	chr11:72624400-72631200	Weak transcription	HepG2	liver
28	chr11:72624400-72632600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
29	chr11:72624400-72652000	Weak transcription	Fetal Muscle Trunk	muscle
30	chr11:72624600-72631200	Weak transcription	Brain Hippocampus Middle	brain
31	chr11:72624600-72631400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
32	chr11:72624600-72631800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
33	chr11:72624600-72632000	Weak transcription	Primary T cells from cord blood	blood
34	chr11:72624600-72632000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
35	chr11:72624600-72632400	Weak transcription	Primary T cells fromperipheralblood	blood
36	chr11:72624600-72634800	Weak transcription	Thymus	Thymus
37	chr11:72624600-72635600	Weak transcription	Primary neutrophils fromperipheralblood	blood
38	chr11:72624800-72632600	Weak transcription	Primary T helper cells fromperipheralblood	blood
39	chr11:72624800-72635800	Weak transcription	Muscle Satellite Cultured Cells	--
40	chr11:72625000-72630000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr11:72625600-72646000	Weak transcription	Fetal Lung	lung
42	chr11:72625800-72633600	Strong transcription	Primary B cells from peripheral blood	blood
43	chr11:72625800-72640400	Weak transcription	Fetal Stomach	stomach
44	chr11:72626000-72633400	Strong transcription	Monocytes-CD14+_RO01746	blood
45	chr11:72626600-72630600	Weak transcription	Brain Anterior Caudate	brain
46	chr11:72626600-72632400	Weak transcription	Fetal Heart	heart
47	chr11:72626600-72635000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
48	chr11:72626800-72631400	Weak transcription	Fetal Thymus	thymus
49	chr11:72627000-72630000	Weak transcription	Primary monocytes fromperipheralblood	blood
50	chr11:72627000-72633600	Strong transcription	Primary B cells from cord blood	blood

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