Variant report

Variant	rs10753723
Chromosome Location	chr1:166299508-166299509
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10753724	0.99[EUR][1000 genomes]
rs10800209	0.95[EUR][1000 genomes]
rs10918421	0.82[EUR][1000 genomes]
rs1891725	0.82[EUR][1000 genomes]
rs2311320	0.89[EUR][1000 genomes]
rs4233412	0.99[EUR][1000 genomes]
rs4282794	0.89[EUR][1000 genomes]
rs4575063	0.89[EUR][1000 genomes]
rs4617382	0.89[EUR][1000 genomes]
rs4657538	0.89[EUR][1000 genomes]
rs4657541	0.98[EUR][1000 genomes]
rs7525163	0.96[EUR][1000 genomes]
rs7536144	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916491	chr1:166000783-166948513	Bivalent/Poised TSS Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:166299400-166299800	Enhancers	iPS-20b Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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