Variant report

Variant	rs10763311
Chromosome Location	chr10:57810963-57810964
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:57810927..57812454-chr10:57820002..57821661,2	K562	blood:

Extended variants
information (count: 50 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs10763312	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs10825743	0.81[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs10825744	0.81[AFR][1000 genomes];0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1319320	0.95[EUR][1000 genomes]
rs1319321	0.95[EUR][1000 genomes]
rs1392728	0.94[EUR][1000 genomes]
rs1392729	0.95[EUR][1000 genomes]
rs1472552	0.95[EUR][1000 genomes]
rs1500748	0.95[EUR][1000 genomes]
rs1500749	0.95[EUR][1000 genomes]
rs1500750	0.95[EUR][1000 genomes]
rs1604195	0.95[EUR][1000 genomes]
rs1604199	0.96[EUR][1000 genomes]
rs1908354	0.81[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs1908356	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1908357	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs3913427	0.83[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs4423113	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4935628	0.96[EUR][1000 genomes]
rs4935630	0.95[EUR][1000 genomes]
rs4935631	0.95[EUR][1000 genomes]
rs4935632	0.95[EUR][1000 genomes]
rs4935633	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4935634	0.93[EUR][1000 genomes]
rs4935636	0.93[EUR][1000 genomes]
rs7069579	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs7069979	0.95[EUR][1000 genomes]
rs7088202	0.95[EUR][1000 genomes]
rs7099211	0.95[EUR][1000 genomes]
rs7099223	0.95[EUR][1000 genomes]
rs7910163	0.95[EUR][1000 genomes]
rs7911062	0.95[EUR][1000 genomes]
rs7911639	0.95[EUR][1000 genomes]
rs7911652	0.94[EUR][1000 genomes]
rs9299566	0.81[EUR][1000 genomes]
rs9415384	0.96[EUR][1000 genomes]
rs9415385	0.96[EUR][1000 genomes]
rs9416445	0.93[EUR][1000 genomes]
rs9804235	0.81[AFR][1000 genomes];0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs9804287	0.81[AFR][1000 genomes];0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs9804334	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1040047	chr10:57007182-57979747	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	nsv1051512	chr10:57470352-58026988	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv540645	chr10:57470352-58026988	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv971885	chr10:57727587-57893001	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	nsv895501	chr10:57736009-57928768	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
6	esv2752691	chr10:57738694-58541894	Enhancers Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
7	nsv895502	chr10:57747976-58099085	Enhancers Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Bivalent/Poised TSS	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
8	esv2750966	chr10:57754594-58023394	Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
9	esv2755897	chr10:57774135-57841233	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs10763311	METRN	trans	parietal	SCAN

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:57810600-57811000	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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