Variant report

Variant	rs10764512
Chromosome Location	chr10:18745202-18745203
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs1001485	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1001486	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10828705	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10828706	0.88[EUR][1000 genomes]
rs10828707	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11014262	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11014270	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11014316	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12221045	0.81[EUR][1000 genomes]
rs12761917	0.88[EUR][1000 genomes]
rs12765646	0.82[EUR][1000 genomes]
rs12782993	0.86[EUR][1000 genomes]
rs1325988	0.81[AMR][1000 genomes]
rs4448592	0.88[EUR][1000 genomes]
rs4747346	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4748469	0.88[EUR][1000 genomes]
rs729245	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs747296	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9299787	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv550042	chr10:18683267-18994583	ZNF genes & repeats Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18732400-18801600	Weak transcription	Pancreas	Pancrea
2	chr10:18739000-18752600	Weak transcription	Right Atrium	heart
3	chr10:18739000-18761000	Weak transcription	Colon Smooth Muscle	Colon
4	chr10:18739800-18745400	Weak transcription	Left Ventricle	heart
5	chr10:18741600-18763200	Weak transcription	Fetal Stomach	stomach
6	chr10:18743400-18746200	Enhancers	Dnd41	blood
7	chr10:18743800-18745400	Enhancers	Placenta	Placenta
8	chr10:18744400-18761800	Weak transcription	Ovary	ovary
9	chr10:18744600-18746400	Enhancers	Fetal Heart	heart
10	chr10:18744800-18745400	Enhancers	Right Ventricle	heart
11	chr10:18744800-18745600	Enhancers	Primary B cells from cord blood	blood
12	chr10:18745000-18745800	Strong transcription	Cortex derived primary cultured neurospheres	brain
13	chr10:18745200-18746600	Enhancers	Primary B cells from peripheral blood	blood
14	chr10:18745200-18750800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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