Variant report

Variant	rs10765615
Chromosome Location	chr11:93270101-93270102
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs11601368	1.00[ASN][1000 genomes]
rs3793995	0.96[ASN][1000 genomes]
rs3794002	1.00[CHD][hapmap]
rs6483248	0.89[CHD][hapmap]
rs7130465	1.00[CHD][hapmap]
rs897558	1.00[CHD][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898181	chr11:93072843-93662459	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	119 gene(s)	inside rSNPs	diseases
2	nsv1039623	chr11:93141461-93328739	Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs10765615	FAM76B	cis	parietal	SCAN

Chromatin state (count:94 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:93255000-93274600	Weak transcription	Hela-S3	cervix
2	chr11:93258400-93274800	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr11:93262400-93271000	Weak transcription	Aorta	Aorta
4	chr11:93263000-93270600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr11:93263200-93275200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
6	chr11:93263600-93270200	Weak transcription	Fetal Muscle Trunk	muscle
7	chr11:93263600-93271200	Weak transcription	Esophagus	oesophagus
8	chr11:93263800-93270200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr11:93263800-93270800	Weak transcription	K562	blood
10	chr11:93264000-93270200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
11	chr11:93264000-93270200	Weak transcription	Colonic Mucosa	Colon
12	chr11:93264000-93270200	Weak transcription	Spleen	Spleen
13	chr11:93264000-93270400	Weak transcription	Duodenum Mucosa	Duodenum
14	chr11:93264000-93270800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr11:93264000-93271600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
16	chr11:93264000-93275000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr11:93264000-93275000	Weak transcription	Rectal Mucosa Donor 31	rectum
18	chr11:93264000-93275200	Weak transcription	HSMMtube	muscle
19	chr11:93264200-93270200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr11:93264200-93273200	Weak transcription	Duodenum Smooth Muscle	Duodenum
21	chr11:93264200-93275000	Weak transcription	Fetal Intestine Large	intestine
22	chr11:93264600-93270400	Weak transcription	Stomach Mucosa	stomach
23	chr11:93264800-93270400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
24	chr11:93264800-93275000	Weak transcription	Thymus	Thymus
25	chr11:93265400-93275000	Weak transcription	H9 Cell Line	embryonic stem cell
26	chr11:93265800-93274600	Weak transcription	Dnd41	blood
27	chr11:93266000-93274600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
28	chr11:93266000-93275000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
29	chr11:93266600-93271200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
30	chr11:93267800-93271800	Enhancers	Fetal Brain Male	brain
31	chr11:93268200-93270600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
32	chr11:93268200-93271200	Weak transcription	Placenta	Placenta
33	chr11:93268400-93270200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
34	chr11:93268400-93271800	Enhancers	Primary hematopoietic stem cells	blood
35	chr11:93268600-93271000	Weak transcription	Right Atrium	heart
36	chr11:93268600-93271600	Enhancers	Cortex derived primary cultured neurospheres	brain
37	chr11:93268800-93270200	Enhancers	Brain Hippocampus Middle	brain
38	chr11:93268800-93270200	Weak transcription	Fetal Intestine Small	intestine
39	chr11:93268800-93270400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
40	chr11:93268800-93270400	Weak transcription	Left Ventricle	heart
41	chr11:93268800-93270600	Enhancers	Primary monocytes fromperipheralblood	blood
42	chr11:93268800-93271400	Enhancers	H1 Cell Line	embryonic stem cell
43	chr11:93268800-93272000	Weak transcription	Primary T cells fromperipheralblood	blood
44	chr11:93268800-93275000	Weak transcription	Fetal Stomach	stomach
45	chr11:93269000-93270200	Weak transcription	Primary neutrophils fromperipheralblood	blood
46	chr11:93269000-93270800	Weak transcription	Fetal Thymus	thymus
47	chr11:93269000-93275000	Weak transcription	NHDF-Ad	bronchial
48	chr11:93269000-93275400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
49	chr11:93269200-93270400	Enhancers	Brain Cingulate Gyrus	brain
50	chr11:93269200-93270600	Enhancers	iPS-15b Cell Line	embryonic stem cell

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