Variant report
| Variant | rs10772539 |
|---|---|
| Chromosome Location | chr12:12339624-12339625 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:12269600-12343200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 2 | chr12:12272200-12344600 | Weak transcription | Primary B cells from cord blood | blood |
| 3 | chr12:12279800-12342800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 4 | chr12:12288200-12342800 | Weak transcription | K562 | blood |
| 5 | chr12:12304000-12353000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 6 | chr12:12312000-12350600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 7 | chr12:12312200-12355800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 8 | chr12:12312200-12362000 | Weak transcription | Hela-S3 | cervix |
| 9 | chr12:12315400-12340200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 10 | chr12:12315400-12371600 | Weak transcription | Lung | lung |
| 11 | chr12:12325400-12360000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 12 | chr12:12325800-12341000 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 13 | chr12:12328400-12339800 | Weak transcription | Ovary | ovary |
| 14 | chr12:12329600-12343200 | Weak transcription | Placenta | Placenta |
| 15 | chr12:12330200-12343200 | Weak transcription | GM12878-XiMat | blood |
| 16 | chr12:12334200-12350800 | Weak transcription | Fetal Thymus | thymus |
| 17 | chr12:12334400-12339800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 18 | chr12:12334400-12343200 | Weak transcription | Fetal Intestine Large | intestine |
| 19 | chr12:12334400-12348400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 20 | chr12:12334400-12349200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 21 | chr12:12334400-12349600 | Weak transcription | Dnd41 | blood |
| 22 | chr12:12334400-12351200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 23 | chr12:12334400-12352000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 24 | chr12:12334400-12354000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 25 | chr12:12334400-12367600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 26 | chr12:12334600-12349200 | Weak transcription | Primary hematopoietic stem cells | blood |
| 27 | chr12:12334800-12346800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 28 | chr12:12334800-12352800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 29 | chr12:12335200-12352000 | Weak transcription | HSMM | muscle |
| 30 | chr12:12335200-12365800 | Weak transcription | NHEK | skin |
| 31 | chr12:12335800-12343600 | Weak transcription | HMEC | breast |
| 32 | chr12:12335800-12354000 | Weak transcription | HSMMtube | muscle |
| 33 | chr12:12336000-12352000 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 34 | chr12:12336000-12354200 | Weak transcription | Primary T cells from cord blood | blood |
| 35 | chr12:12336000-12355600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 36 | chr12:12336200-12340600 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 37 | chr12:12336200-12343000 | Weak transcription | Brain Substantia Nigra | brain |
| 38 | chr12:12336200-12343200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 39 | chr12:12336200-12343400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 40 | chr12:12336200-12343600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 41 | chr12:12336200-12347000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 42 | chr12:12336200-12360000 | Weak transcription | Aorta | Aorta |
| 43 | chr12:12336200-12363200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 44 | chr12:12336200-12369800 | Weak transcription | Left Ventricle | heart |
| 45 | chr12:12336200-12381000 | Weak transcription | Pancreas | Pancrea |
| 46 | chr12:12336400-12339800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 47 | chr12:12336400-12340000 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 48 | chr12:12336400-12341200 | Weak transcription | Fetal Kidney | kidney |
| 49 | chr12:12336400-12343400 | Weak transcription | Brain Angular Gyrus | brain |
| 50 | chr12:12336400-12343800 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
