Variant report

Variant rs10775679
Chromosome Location chr21:46389752-46389753
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46364200-46391400 Strong transcription Dnd41 blood
2 chr21:46380000-46396600 Weak transcription Brain Substantia Nigra brain
3 chr21:46380200-46402600 Weak transcription Aorta Aorta
4 chr21:46381200-46391200 Enhancers Fetal Heart heart
5 chr21:46381200-46396400 Weak transcription Psoas Muscle Psoas
6 chr21:46382800-46404800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr21:46383600-46390400 Enhancers Primary T killer naive cells fromperipheralblood blood
8 chr21:46384200-46390000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr21:46384200-46391200 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
10 chr21:46384200-46391400 Strong transcription H1 Cell Line embryonic stem cell
11 chr21:46384200-46399600 Strong transcription Fetal Intestine Small intestine
12 chr21:46384600-46389800 Genic enhancers Fetal Thymus thymus
13 chr21:46384800-46390000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr21:46384800-46390600 Enhancers Primary monocytes fromperipheralblood blood
15 chr21:46385000-46393200 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr21:46385000-46401400 Strong transcription Thymus Thymus
17 chr21:46385200-46390000 Enhancers Primary B cells from cord blood blood
18 chr21:46385200-46393000 Genic enhancers Fetal Muscle Leg muscle
19 chr21:46385400-46393000 Genic enhancers Fetal Adrenal Gland Adrenal Gland
20 chr21:46385400-46393800 Genic enhancers Fetal Muscle Trunk muscle
21 chr21:46385800-46393000 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
22 chr21:46386200-46391200 Genic enhancers Fetal Stomach stomach
23 chr21:46386200-46393200 Genic enhancers Spleen Spleen
24 chr21:46386400-46392400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr21:46386400-46400600 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr21:46386600-46391200 Genic enhancers Lung lung
27 chr21:46386800-46390000 Strong transcription iPS-18 Cell Line embryonic stem cell
28 chr21:46386800-46390000 Genic enhancers Primary T helper cells fromperipheralblood blood
29 chr21:46386800-46400600 Weak transcription Small Intestine intestine
30 chr21:46387000-46390200 Genic enhancers Primary T cells fromperipheralblood blood
31 chr21:46387000-46391200 Strong transcription Sigmoid Colon Sigmoid Colon
32 chr21:46387200-46390000 Genic enhancers Primary T helper cells PMA-I stimulated --
33 chr21:46387200-46390200 Strong transcription HUES64 Cell Line embryonic stem cell
34 chr21:46387200-46390200 Genic enhancers Primary T regulatory cells fromperipheralblood blood
35 chr21:46387200-46390200 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
36 chr21:46387200-46390400 Strong transcription iPS-20b Cell Line embryonic stem cell
37 chr21:46387200-46390400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
38 chr21:46387200-46391000 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
39 chr21:46387400-46390200 Strong transcription H9 Cell Line embryonic stem cell
40 chr21:46387400-46390200 Strong transcription Brain Cingulate Gyrus brain
41 chr21:46387400-46391000 Strong transcription HUES48 Cell Line embryonic stem cell
42 chr21:46387400-46391000 Genic enhancers Placenta Placenta
43 chr21:46387400-46391000 Enhancers Placenta Amnion Placenta Amnion
44 chr21:46387600-46390200 Genic enhancers Adipose Nuclei Adipose
45 chr21:46387600-46390200 Strong transcription GM12878-XiMat blood
46 chr21:46387600-46390400 Strong transcription Cortex derived primary cultured neurospheres brain
47 chr21:46387600-46390400 Strong transcription Fetal Intestine Large intestine
48 chr21:46387600-46391000 Strong transcription Brain Germinal Matrix brain
49 chr21:46387600-46391200 Weak transcription Fetal Brain Male brain
50 chr21:46387600-46396000 Strong transcription Pancreas Pancrea

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