Variant report

Variant rs56199687
Chromosome Location chr21:46360567-46360568
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46358800-46360600 Active TSS iPS-15b Cell Line embryonic stem cell
2 chr21:46358800-46360800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr21:46358800-46361000 Active TSS HUES6 Cell Line embryonic stem cell
4 chr21:46359000-46361000 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr21:46359000-46361000 Active TSS Fetal Kidney kidney
6 chr21:46359000-46361200 Active TSS A549 lung
7 chr21:46359000-46361600 Active TSS H9 Cell Line embryonic stem cell
8 chr21:46359000-46361600 Active TSS HUES48 Cell Line embryonic stem cell
9 chr21:46359200-46360600 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr21:46359200-46360600 Active TSS Pancreatic Islets Pancreatic Islet
11 chr21:46359200-46360800 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr21:46359200-46360800 Active TSS HUES64 Cell Line embryonic stem cell
13 chr21:46359200-46360800 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
14 chr21:46359200-46360800 Active TSS ES-UCSF4 Cell Line embryonic stem cell
15 chr21:46359200-46361000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr21:46359200-46361000 Active TSS iPS-20b Cell Line embryonic stem cell
17 chr21:46359200-46361000 Flanking Active TSS Primary B cells from cord blood blood
18 chr21:46359200-46361200 Active TSS Psoas Muscle Psoas
19 chr21:46359200-46361200 Active TSS GM12878-XiMat blood
20 chr21:46359200-46361400 Active TSS Left Ventricle heart
21 chr21:46359200-46361400 Active TSS HSMMtube muscle
22 chr21:46359400-46360600 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
23 chr21:46359400-46360600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr21:46359400-46360600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr21:46359400-46360600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr21:46359400-46360600 Active TSS Brain Angular Gyrus brain
27 chr21:46359400-46360600 Active TSS Brain Inferior Temporal Lobe brain
28 chr21:46359400-46360600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
29 chr21:46359400-46360600 Active TSS Brain Substantia Nigra brain
30 chr21:46359400-46360600 Active TSS Colon Smooth Muscle Colon
31 chr21:46359400-46360600 Active TSS Duodenum Smooth Muscle Duodenum
32 chr21:46359400-46360600 Active TSS Fetal Heart heart
33 chr21:46359400-46360600 Active TSS Fetal Stomach stomach
34 chr21:46359400-46360600 Active TSS Gastric stomach
35 chr21:46359400-46360600 Active TSS Lung lung
36 chr21:46359400-46360600 Active TSS Placenta Amnion Placenta Amnion
37 chr21:46359400-46360600 Active TSS Rectal Mucosa Donor 29 rectum
38 chr21:46359400-46360600 Active TSS Rectal Mucosa Donor 31 rectum
39 chr21:46359400-46360600 Active TSS Rectal Smooth Muscle rectum
40 chr21:46359400-46360600 Active TSS Small Intestine intestine
41 chr21:46359400-46360600 Active TSS Thymus Thymus
42 chr21:46359400-46360600 Active TSS Hela-S3 cervix
43 chr21:46359400-46360600 Active TSS NHLF lung
44 chr21:46359400-46360800 Active TSS ES-WA7 Cell Line embryonic stem cell
45 chr21:46359400-46360800 Active TSS H1 Cell Line embryonic stem cell
46 chr21:46359400-46360800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr21:46359400-46360800 Active TSS Breast Myoepithelial Primary Cells Breast
48 chr21:46359400-46360800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
49 chr21:46359400-46360800 Active TSS Aorta Aorta
50 chr21:46359400-46360800 Active TSS Fetal Intestine Large intestine

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