Variant report

Variant	rs10784276
Chromosome Location	chr12:62347124-62347125
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11174244	0.92[CHB][hapmap]
rs11174250	0.92[CHB][hapmap];0.84[CHD][hapmap];1.00[LWK][hapmap];1.00[YRI][hapmap]
rs11174258	0.80[ASN][1000 genomes]
rs11174259	0.81[ASN][1000 genomes]
rs12824077	0.92[CHB][hapmap];0.84[CHD][hapmap];1.00[LWK][hapmap];0.87[YRI][hapmap];0.83[ASN][1000 genomes]
rs755660	0.92[CHB][hapmap];0.84[CHD][hapmap];1.00[LWK][hapmap];1.00[YRI][hapmap]
rs7964815	0.92[CHB][hapmap];0.84[CHD][hapmap]
rs7981014	0.92[CHB][hapmap];0.84[CHD][hapmap]
rs988971	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1039741	chr12:62046850-62491052	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links