Variant report

Variant	rs1079431
Chromosome Location	chr11:121780631-121780632
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs11218457	0.87[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs11218458	0.91[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs1219419	0.97[ASN][1000 genomes]
rs12271581	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs12281134	0.87[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs1530665	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3802909	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3953235	0.86[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs7934350	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7939651	0.91[AFR][1000 genomes];0.91[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:121780200-121781000	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr11:121780200-121781000	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr11:121780200-121781200	Flanking Active TSS	NHDF-Ad	bronchial
4	chr11:121780400-121780800	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr11:121780400-121780800	Active TSS	Osteobl	bone
6	chr11:121780600-121780800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr11:121780600-121780800	Enhancers	Monocytes-CD14+_RO01746	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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