Variant report
Variant | rs10810885 |
---|---|
Chromosome Location | chr9:18018133-18018134 |
allele | C/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
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rs_ID | r2[population] |
---|---|
rs10511648 | 0.88[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs10511649 | 0.91[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs10810886 | 1.00[ASN][1000 genomes] |
rs10963398 | 1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs10963399 | 1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes] |
rs10963403 | 1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs10963414 | 1.00[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs10963415 | 0.92[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs10963416 | 0.96[ASN][1000 genomes] |
rs10963418 | 0.85[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs10963431 | 0.93[ASN][1000 genomes] |
rs12156463 | 0.86[ASN][1000 genomes] |
rs12337268 | 0.84[AFR][1000 genomes];0.82[EUR][1000 genomes] |
rs12341372 | 0.86[ASN][1000 genomes] |
rs12346224 | 0.83[ASN][1000 genomes] |
rs12347884 | 0.90[ASN][1000 genomes] |
rs12350936 | 0.88[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs12376842 | 0.90[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs1329919 | 0.93[ASN][1000 genomes] |
rs1329927 | 0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs34384948 | 0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs67660830 | 0.93[ASN][1000 genomes] |
rs7350308 | 0.84[AFR][1000 genomes];0.80[ASN][1000 genomes] |
rs9987690 | 0.88[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs9987691 | 0.86[ASN][1000 genomes] |
rs9987764 | 0.93[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv613706 | chr9:17718918-18090934 | Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Strong transcription Genic enhancers | TF binding regionCpG islandChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
2 | nsv613707 | chr9:17720175-18070475 | Bivalent Enhancer Enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription Weak transcription Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers | TF binding regionCpG islandChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
3 | nsv613708 | chr9:17720175-18072085 | Enhancers Bivalent/Poised TSS Weak transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Strong transcription Genic enhancers | TF binding regionCpG islandChromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
4 | nsv1021862 | chr9:17931213-18052101 | Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
5 | esv2752288 | chr9:17965723-18036892 | Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
6 | nsv1021605 | chr9:18002205-18271109 | Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS | Chromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr9:18004600-18018600 | Weak transcription | Aorta | Aorta |
2 | chr9:18012000-18018200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
3 | chr9:18016400-18022000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |