The 2.0 version of rSNPBase

Variant report

Variant rs1082028
Chromosome Location chr7:40004006-40004007
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:39991800-40005200 Weak transcription Lung lung
2 chr7:39992000-40006400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr7:39993600-40048200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr7:39994200-40008000 Weak transcription HUES64 Cell Line embryonic stem cell
5 chr7:39994200-40027200 Weak transcription HSMM muscle
6 chr7:39994600-40009000 Weak transcription HMEC breast
7 chr7:39994800-40006600 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr7:39994800-40008000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr7:39994800-40008000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr7:39994800-40008400 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr7:39994800-40008400 Weak transcription NHEK skin
12 chr7:39994800-40018000 Weak transcription Primary hematopoietic stem cells blood
13 chr7:39995000-40008000 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr7:39995000-40009000 Weak transcription Osteobl bone
15 chr7:39995000-40018200 Weak transcription Spleen Spleen
16 chr7:39995200-40009000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr7:39995200-40010400 Weak transcription Rectal Smooth Muscle rectum
18 chr7:39995200-40042600 Weak transcription K562 blood
19 chr7:39995600-40007800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr7:39996000-40008800 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr7:39996600-40008000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr7:39996800-40006600 Weak transcription Left Ventricle heart
23 chr7:39996800-40008000 Weak transcription Pancreas Pancrea
24 chr7:39996800-40014800 Weak transcription Right Ventricle heart
25 chr7:39996800-40016600 Weak transcription Gastric stomach
26 chr7:39997200-40015200 Weak transcription Small Intestine intestine
27 chr7:39997800-40027400 Weak transcription Duodenum Mucosa Duodenum
28 chr7:39998000-40027200 Weak transcription Hela-S3 cervix
29 chr7:39998200-40006600 Weak transcription Primary B cells from peripheral blood blood
30 chr7:39998200-40007000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr7:39998200-40007800 Weak transcription Brain Substantia Nigra brain
32 chr7:39998200-40008000 Weak transcription Primary T cells from cord blood blood
33 chr7:39998200-40009000 Weak transcription Brain Angular Gyrus brain
34 chr7:39998200-40009800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr7:39998200-40010400 Weak transcription Colon Smooth Muscle Colon
36 chr7:39998200-40013400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr7:39998400-40007800 Weak transcription Primary B cells from cord blood blood
38 chr7:39998400-40010200 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr7:39998600-40006600 Weak transcription Primary neutrophils fromperipheralblood blood
40 chr7:39999400-40005600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
41 chr7:39999400-40007200 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr7:39999800-40006600 Weak transcription Primary T helper naive cells fromperipheralblood blood
43 chr7:39999800-40013600 Weak transcription Monocytes-CD14+_RO01746 blood
44 chr7:40000000-40005600 Weak transcription Primary T killer naive cells fromperipheralblood blood
45 chr7:40000400-40016600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr7:40000600-40011400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr7:40000800-40006600 Weak transcription Primary T cells fromperipheralblood blood
48 chr7:40001000-40005600 Weak transcription Primary T helper cells PMA-I stimulated --
49 chr7:40001000-40006400 Weak transcription Fetal Stomach stomach
50 chr7:40001000-40006600 Weak transcription Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015