The 2.0 version of rSNPBase

Variant report

Variant rs773403
Chromosome Location chr7:39999905-39999906
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:39991800-40000200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr7:39991800-40000800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr7:39991800-40005200 Weak transcription Lung lung
4 chr7:39992000-40006400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr7:39992600-40001200 Weak transcription Placenta Placenta
6 chr7:39993400-40000000 Weak transcription Fetal Thymus thymus
7 chr7:39993400-40001000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr7:39993600-40000000 Enhancers Primary T killer naive cells fromperipheralblood blood
9 chr7:39993600-40048200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr7:39993800-40000000 Weak transcription HSMMtube muscle
11 chr7:39993800-40000800 Weak transcription H1 Cell Line embryonic stem cell
12 chr7:39993800-40000800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr7:39994000-40000800 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr7:39994200-40008000 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr7:39994200-40027200 Weak transcription HSMM muscle
16 chr7:39994400-40000600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr7:39994600-40000800 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr7:39994600-40000800 Weak transcription Thymus Thymus
19 chr7:39994600-40009000 Weak transcription HMEC breast
20 chr7:39994800-40000800 Weak transcription Stomach Smooth Muscle stomach
21 chr7:39994800-40006600 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr7:39994800-40008000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr7:39994800-40008000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr7:39994800-40008400 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr7:39994800-40008400 Weak transcription NHEK skin
26 chr7:39994800-40018000 Weak transcription Primary hematopoietic stem cells blood
27 chr7:39995000-40001000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr7:39995000-40001000 Weak transcription Brain Germinal Matrix brain
29 chr7:39995000-40008000 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr7:39995000-40009000 Weak transcription Osteobl bone
31 chr7:39995000-40018200 Weak transcription Spleen Spleen
32 chr7:39995200-40000400 Enhancers Primary T helper cells fromperipheralblood blood
33 chr7:39995200-40000800 Weak transcription Fetal Muscle Leg muscle
34 chr7:39995200-40000800 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr7:39995200-40000800 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr7:39995200-40001000 Enhancers Primary T helper cells PMA-I stimulated --
37 chr7:39995200-40001400 Weak transcription HUVEC blood vessel
38 chr7:39995200-40002400 Weak transcription Muscle Satellite Cultured Cells --
39 chr7:39995200-40009000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr7:39995200-40010400 Weak transcription Rectal Smooth Muscle rectum
41 chr7:39995200-40042600 Weak transcription K562 blood
42 chr7:39995600-40007800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr7:39996000-40008800 Weak transcription Rectal Mucosa Donor 29 rectum
44 chr7:39996600-40008000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr7:39996800-40000600 Weak transcription Ovary ovary
46 chr7:39996800-40002600 Weak transcription Fetal Intestine Large intestine
47 chr7:39996800-40003000 Weak transcription Fetal Brain Male brain
48 chr7:39996800-40006600 Weak transcription Left Ventricle heart
49 chr7:39996800-40008000 Weak transcription Pancreas Pancrea
50 chr7:39996800-40014800 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015