Variant report

Variant	rs10834473
Chromosome Location	chr11:24769313-24769314
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs11028131	0.86[EUR][1000 genomes]
rs11028134	0.89[EUR][1000 genomes]
rs71458929	0.89[EUR][1000 genomes]
rs7938825	0.90[AFR][1000 genomes]
rs7950404	0.90[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1052730	chr11:24695821-25272497	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1053055	chr11:24700012-25293551	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv553821	chr11:24746937-24775513	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
4	nsv897094	chr11:24761831-24793160	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:24768400-24770000	Enhancers	Dnd41	blood
2	chr11:24768600-24770400	Enhancers	Primary B cells from cord blood	blood
3	chr11:24768600-24770400	Enhancers	Primary B cells from peripheral blood	blood
4	chr11:24768800-24769600	Enhancers	Fetal Muscle Leg	muscle
5	chr11:24768800-24769800	Enhancers	Esophagus	oesophagus
6	chr11:24768800-24769800	Enhancers	Fetal Heart	heart
7	chr11:24768800-24770000	Enhancers	Primary hematopoietic stem cells short term culture	blood
8	chr11:24768800-24770000	Enhancers	Thymus	Thymus
9	chr11:24768800-24770200	Enhancers	Fetal Thymus	thymus
10	chr11:24769000-24769400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr11:24769000-24769600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr11:24769000-24769800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr11:24769000-24779000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
14	chr11:24769200-24769600	Enhancers	HUES6 Cell Line	embryonic stem cell
15	chr11:24769200-24769600	Enhancers	Fetal Muscle Trunk	muscle
16	chr11:24769200-24769600	Enhancers	Hela-S3	cervix
17	chr11:24769200-24769600	Enhancers	NHEK	skin
18	chr11:24769200-24769800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
19	chr11:24769200-24769800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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