The 2.0 version of rSNPBase

Variant report

Variant rs10835247
Chromosome Location chr11:3910306-3910307
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:3888600-3911200 Weak transcription Dnd41 blood
2 chr11:3889200-3913400 Weak transcription Aorta Aorta
3 chr11:3891400-3915000 Enhancers Primary B cells from peripheral blood blood
4 chr11:3899200-3926200 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr11:3899800-3915600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr11:3900000-3916000 Weak transcription Spleen Spleen
7 chr11:3901200-3914600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr11:3902000-3911400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr11:3902200-3914600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr11:3902200-3916400 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr11:3902200-3916400 Weak transcription Stomach Smooth Muscle stomach
12 chr11:3902400-3910400 Enhancers Primary neutrophils fromperipheralblood blood
13 chr11:3902400-3916400 Weak transcription Fetal Intestine Small intestine
14 chr11:3902400-3923800 Weak transcription Gastric stomach
15 chr11:3905800-3911000 Weak transcription K562 blood
16 chr11:3905800-3915200 Weak transcription Esophagus oesophagus
17 chr11:3905800-3915200 Weak transcription Right Ventricle heart
18 chr11:3906000-3913000 Weak transcription Small Intestine intestine
19 chr11:3906000-3914200 Weak transcription Primary T cells from cord blood blood
20 chr11:3906000-3914600 Enhancers Primary B cells from cord blood blood
21 chr11:3906000-3915200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr11:3906000-3915200 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr11:3907000-3910800 Enhancers Primary T cells fromperipheralblood blood
24 chr11:3907000-3913200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
25 chr11:3907200-3912200 Enhancers Primary T helper cells fromperipheralblood blood
26 chr11:3907200-3915600 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr11:3907400-3914600 Weak transcription Osteobl bone
28 chr11:3907400-3915400 Weak transcription Lung lung
29 chr11:3907400-3915600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr11:3907400-3923600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr11:3907600-3915400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr11:3907600-3922600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr11:3907800-3915200 Weak transcription HMEC breast
34 chr11:3908000-3910400 Enhancers Psoas Muscle Psoas
35 chr11:3908000-3912000 Enhancers Primary T helper cells PMA-I stimulated --
36 chr11:3908200-3910400 Enhancers Primary T helper naive cells fromperipheralblood blood
37 chr11:3908200-3910400 Enhancers GM12878-XiMat blood
38 chr11:3908200-3914000 Enhancers Primary T helper naive cells from peripheral blood blood
39 chr11:3908400-3911400 Enhancers Primary T helper 17 cells PMA-I stimulated --
40 chr11:3908400-3912400 Enhancers Primary T killer naive cells fromperipheralblood blood
41 chr11:3908800-3911000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
42 chr11:3909200-3910400 Enhancers Sigmoid Colon Sigmoid Colon
43 chr11:3909400-3910600 Enhancers Primary mononuclear cells fromperipheralblood Blood
44 chr11:3909600-3910800 Weak transcription Liver Liver
45 chr11:3909600-3910800 Weak transcription HepG2 liver
46 chr11:3909600-3911400 Weak transcription Primary T killer memory cells from peripheral blood blood
47 chr11:3909600-3914400 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr11:3909600-3915600 Weak transcription Colon Smooth Muscle Colon
49 chr11:3909800-3910400 Enhancers Placenta Placenta
50 chr11:3909800-3911600 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015