Variant report

Variant	rs10838571
Chromosome Location	chr11:46182461-46182462
allele	A/C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs1024004	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10734541	1.00[ASN][1000 genomes]
rs10769193	1.00[ASN][1000 genomes]
rs2029482	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2029483	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2863725	0.80[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2902551	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4387328	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4756064	1.00[ASN][1000 genomes]
rs61884129	1.00[ASN][1000 genomes]
rs6485666	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7121210	0.95[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7925296	1.00[ASN][1000 genomes]
rs7925932	1.00[ASN][1000 genomes]
rs923531	0.80[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9734613	1.00[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:46180000-46183000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr11:46181800-46183400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr11:46182000-46183000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr11:46182000-46183000	Enhancers	NHEK	skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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