Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	E2F4	chr12:10025380-10025570	MCF10A-Er-Src	breast:	n/a	n/a
2	POLR2A	chr12:10025439-10025545	MCF-7	breast:	n/a	n/a
3	POLR2A	chr12:10025385-10025643	A549	lung:	n/a	n/a
4	FOS	chr12:10025397-10025493	MCF10A-Er-Src	breast:	n/a	n/a
5	MYC	chr12:10025285-10025686	MCF10A-Er-Src	breast:	n/a	n/a
6	MYC	chr12:10025293-10025778	MCF10A-Er-Src	breast:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:10024279..10026522-chr12:10046207..10048850,2	K562	blood:
2	chr12:10024036..10026643-chr12:10029276..10031174,3	K562	blood:

Variant related genes	Relation type
CLEC2B	TF binding region

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10219684	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10844998	0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1814494	0.96[ASN][1000 genomes]
rs1814495	0.86[ASN][1000 genomes]
rs4285965	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4287401	0.93[ASN][1000 genomes]
rs4764045	0.96[ASN][1000 genomes]
rs4764046	0.97[ASN][1000 genomes]
rs4764047	0.97[ASN][1000 genomes]
rs5017882	0.97[ASN][1000 genomes]
rs5017883	0.91[AFR][1000 genomes];0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs5017884	0.97[ASN][1000 genomes]
rs5017885	0.93[ASN][1000 genomes]
rs5017886	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs5017887	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7134094	0.88[AFR][1000 genomes];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7138292	0.97[ASN][1000 genomes]
rs7297667	0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7300903	0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7305724	0.97[ASN][1000 genomes]
rs7312942	0.97[ASN][1000 genomes]
rs7313246	0.97[ASN][1000 genomes]
rs935537	0.91[AFR][1000 genomes];0.81[AMR][1000 genomes];0.84[ASN][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:10023400-10025600	Enhancers	Primary hematopoietic stem cells	blood
2	chr12:10024200-10025600	Enhancers	Breast Myoepithelial Primary Cells	Breast
3	chr12:10024200-10026200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr12:10024400-10026200	Enhancers	HMEC	breast
5	chr12:10024800-10025600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr12:10024800-10025600	Active TSS	Skeletal Muscle Male	skeletal muscle
7	chr12:10025000-10025600	Enhancers	Right Ventricle	heart
8	chr12:10025000-10025600	Enhancers	Skeletal Muscle Female	skeletal muscle
9	chr12:10025200-10025600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr12:10025200-10025600	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr12:10025200-10025600	Enhancers	Fetal Muscle Trunk	muscle
12	chr12:10025200-10025600	Enhancers	Fetal Muscle Leg	muscle
13	chr12:10025200-10025600	Enhancers	Placenta	Placenta
14	chr12:10025200-10025800	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr12:10025200-10025800	Enhancers	Esophagus	oesophagus
16	chr12:10025400-10025600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr12:10025400-10025600	Enhancers	Ovary	ovary
18	chr12:10025400-10025800	Enhancers	NHEK	skin

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