Variant report

Variant	rs10850875
Chromosome Location	chr12:118079840-118079841
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10850880	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11068602	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12823037	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1568162	0.92[ASN][1000 genomes]
rs1976754	0.93[ASN][1000 genomes]
rs4492895	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4766866	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4766867	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4767591	0.85[EUR][1000 genomes]
rs4767594	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7136309	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7298538	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7305116	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832527	chr12:117974007-118110244	Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:118076600-118089000	Weak transcription	Pancreas	Pancrea

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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