Variant report

Variant rs10854696
Chromosome Location chr22:22271458-22271459
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:22256200-22271600 Weak transcription Brain Germinal Matrix brain
2 chr22:22256600-22273600 Weak transcription Lung lung
3 chr22:22256800-22271600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr22:22257000-22277600 Weak transcription Aorta Aorta
5 chr22:22257200-22273400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr22:22257600-22273400 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr22:22258600-22271600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr22:22258800-22274400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr22:22259000-22271600 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr22:22259200-22271600 Weak transcription Right Ventricle heart
11 chr22:22259200-22271600 Weak transcription Spleen Spleen
12 chr22:22264600-22271600 Weak transcription HSMM muscle
13 chr22:22267000-22273400 Weak transcription Primary neutrophils fromperipheralblood blood
14 chr22:22268800-22273600 Weak transcription Primary T cells from cord blood blood
15 chr22:22269200-22271600 Weak transcription Gastric stomach
16 chr22:22269200-22274800 Weak transcription Fetal Intestine Small intestine
17 chr22:22269600-22271600 Strong transcription Right Atrium heart
18 chr22:22270000-22272600 Enhancers Fetal Muscle Trunk muscle
19 chr22:22270000-22275800 Weak transcription Fetal Brain Male brain
20 chr22:22270200-22274400 Weak transcription Primary monocytes fromperipheralblood blood
21 chr22:22270400-22271600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr22:22270400-22272600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
23 chr22:22270400-22272800 Enhancers Fetal Adrenal Gland Adrenal Gland
24 chr22:22270600-22271800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr22:22270600-22272600 Enhancers Ovary ovary
26 chr22:22270600-22272600 Enhancers Pancreas Pancrea
27 chr22:22270600-22276600 Enhancers Breast Myoepithelial Primary Cells Breast
28 chr22:22270800-22273000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
29 chr22:22270800-22274400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr22:22271000-22272200 Enhancers Brain Inferior Temporal Lobe brain
31 chr22:22271000-22272200 Enhancers Placenta Placenta
32 chr22:22271000-22272400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
33 chr22:22271000-22272600 Enhancers Fetal Muscle Leg muscle
34 chr22:22271000-22273000 Enhancers Cortex derived primary cultured neurospheres brain
35 chr22:22271200-22271800 Enhancers Adipose Nuclei Adipose
36 chr22:22271200-22272200 Enhancers ES-I3 Cell Line embryonic stem cell
37 chr22:22271200-22272200 Enhancers Muscle Satellite Cultured Cells --
38 chr22:22271200-22272200 Enhancers Fetal Stomach stomach
39 chr22:22271200-22272400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr22:22271200-22272400 Enhancers iPS-18 Cell Line embryonic stem cell
41 chr22:22271200-22272400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr22:22271200-22272400 Enhancers Brain Cingulate Gyrus brain
43 chr22:22271200-22272400 Enhancers Brain Substantia Nigra brain
44 chr22:22271200-22272600 Enhancers H1 Cell Line embryonic stem cell
45 chr22:22271200-22272600 Enhancers iPS-20b Cell Line embryonic stem cell
46 chr22:22271200-22273400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr22:22271400-22271600 Enhancers Stomach Smooth Muscle stomach
48 chr22:22271400-22272000 Enhancers iPS-15b Cell Line embryonic stem cell
49 chr22:22271400-22272400 Enhancers HUES64 Cell Line embryonic stem cell
50 chr22:22271400-22272400 Flanking Active TSS HepG2 liver

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