Variant report

Variant rs5995209
Chromosome Location chr22:22272229-22272230
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:22256600-22273600 Weak transcription Lung lung
2 chr22:22257000-22277600 Weak transcription Aorta Aorta
3 chr22:22257200-22273400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr22:22257600-22273400 Weak transcription Primary hematopoietic stem cells short term culture blood
5 chr22:22258800-22274400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr22:22267000-22273400 Weak transcription Primary neutrophils fromperipheralblood blood
7 chr22:22268800-22273600 Weak transcription Primary T cells from cord blood blood
8 chr22:22269200-22274800 Weak transcription Fetal Intestine Small intestine
9 chr22:22270000-22272600 Enhancers Fetal Muscle Trunk muscle
10 chr22:22270000-22275800 Weak transcription Fetal Brain Male brain
11 chr22:22270200-22274400 Weak transcription Primary monocytes fromperipheralblood blood
12 chr22:22270400-22272600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
13 chr22:22270400-22272800 Enhancers Fetal Adrenal Gland Adrenal Gland
14 chr22:22270600-22272600 Enhancers Ovary ovary
15 chr22:22270600-22272600 Enhancers Pancreas Pancrea
16 chr22:22270600-22276600 Enhancers Breast Myoepithelial Primary Cells Breast
17 chr22:22270800-22273000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
18 chr22:22270800-22274400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr22:22271000-22272400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
20 chr22:22271000-22272600 Enhancers Fetal Muscle Leg muscle
21 chr22:22271000-22273000 Enhancers Cortex derived primary cultured neurospheres brain
22 chr22:22271200-22272400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr22:22271200-22272400 Enhancers iPS-18 Cell Line embryonic stem cell
24 chr22:22271200-22272400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr22:22271200-22272400 Enhancers Brain Cingulate Gyrus brain
26 chr22:22271200-22272400 Enhancers Brain Substantia Nigra brain
27 chr22:22271200-22272600 Enhancers H1 Cell Line embryonic stem cell
28 chr22:22271200-22272600 Enhancers iPS-20b Cell Line embryonic stem cell
29 chr22:22271200-22273400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr22:22271400-22272400 Enhancers HUES64 Cell Line embryonic stem cell
31 chr22:22271400-22272400 Flanking Active TSS HepG2 liver
32 chr22:22271400-22272600 Enhancers HUES6 Cell Line embryonic stem cell
33 chr22:22271400-22272600 Enhancers Brain Anterior Caudate brain
34 chr22:22271400-22272600 Enhancers Fetal Heart heart
35 chr22:22271600-22272400 Enhancers ES-WA7 Cell Line embryonic stem cell
36 chr22:22271600-22272400 Enhancers HUES48 Cell Line embryonic stem cell
37 chr22:22271600-22272400 Enhancers Right Ventricle heart
38 chr22:22271600-22272400 Enhancers Skeletal Muscle Male skeletal muscle
39 chr22:22271600-22272400 Enhancers HSMM muscle
40 chr22:22271600-22272400 Enhancers HSMMtube muscle
41 chr22:22271600-22272400 Enhancers K562 blood
42 chr22:22271600-22272600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr22:22271600-22272600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr22:22271600-22272600 Enhancers Brain Hippocampus Middle brain
45 chr22:22271600-22272600 Enhancers Gastric stomach
46 chr22:22271600-22272600 Enhancers Spleen Spleen
47 chr22:22271600-22272800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr22:22271600-22273400 Weak transcription Fetal Brain Female brain
49 chr22:22271800-22272400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
50 chr22:22271800-22272400 Enhancers Left Ventricle heart

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